| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946160
Identifier: 119946160
GI number: 119946160
Start: 3079915
End: 3080397
Strand: Direct
Name: 119946160
Synonym: Ping_2520
Alternate gene names: NA
Gene position: 3079915-3080397 (Clockwise)
Preceding gene: 119946158
Following gene: 119946167
Centisome position: 67.55
GC content: 38.3
Gene sequence:
>483_bases TTGGCAGAAGAATCACAACAAGCACTGCAGCAGTTTTCTGCCAACATTCTCTTTCCACTTGAACAAAAATTTCATAAAAT CAATATCACCTACGGCTTCACTTCATTTGAACTTCTTAAATACATTAAAAAGAACAGCCCGGGTGAGATATCCCCGGAAA GAGATCAGCATGCTGCACATGAATTAAACAGCAGAGGTAATAGAATTTGCAAACGAGACGGGGCTGCATGCGATATTGTG GTGGCAGGTTATGAGAACCAGATGCAACTCATTGCACAATACATTATTACTGAGTTACCCTTTGATAGGCTGTATTTTTA TGGAAAAAACCGCCCTCTTCATGTTTCATTTGGGCCTCTTCATAAACGCTATTTATACGTTAAAGAGCGTGATAACAATG GAAAACGCAATGCAGGAAAAGGTGATAAATACAGATACCATTTTGGATTGTTGAAGTATTCCCCTAATTCAAATAAGAAC TAA
Upstream 100 bases:
>100_bases AAAAGTATTTTTTAACTTATAGAGTGGAATAAAAAATGCGCTTAGATTTTTTAAATTGGTTTCAACAAAACACATTAATT ATCAAGGTATTAATCAACCC
Downstream 100 bases:
>100_bases TTATTACTTTTTCCCACAAACTAAATCTCTTTCAGCAATAAGTTCTGCATTATTATTTCCCATTGCTTTTAAAATTAACA AATTACATTGTTTTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAEESQQALQQFSANILFPLEQKFHKINITYGFTSFELLKYIKKNSPGEISPERDQHAAHELNSRGNRICKRDGAACDIV VAGYENQMQLIAQYIITELPFDRLYFYGKNRPLHVSFGPLHKRYLYVKERDNNGKRNAGKGDKYRYHFGLLKYSPNSNKN
Sequences:
>Translated_160_residues MAEESQQALQQFSANILFPLEQKFHKINITYGFTSFELLKYIKKNSPGEISPERDQHAAHELNSRGNRICKRDGAACDIV VAGYENQMQLIAQYIITELPFDRLYFYGKNRPLHVSFGPLHKRYLYVKERDNNGKRNAGKGDKYRYHFGLLKYSPNSNKN >Mature_159_residues AEESQQALQQFSANILFPLEQKFHKINITYGFTSFELLKYIKKNSPGEISPERDQHAAHELNSRGNRICKRDGAACDIVV AGYENQMQLIAQYIITELPFDRLYFYGKNRPLHVSFGPLHKRYLYVKERDNNGKRNAGKGDKYRYHFGLLKYSPNSNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18621; Mature: 18490
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEESQQALQQFSANILFPLEQKFHKINITYGFTSFELLKYIKKNSPGEISPERDQHAAH CCCHHHHHHHHHCCCEEEECCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHH ELNSRGNRICKRDGAACDIVVAGYENQMQLIAQYIITELPFDRLYFYGKNRPLHVSFGPL HHHHCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEEEECCC HKRYLYVKERDNNGKRNAGKGDKYRYHFGLLKYSPNSNKN CEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure AEESQQALQQFSANILFPLEQKFHKINITYGFTSFELLKYIKKNSPGEISPERDQHAAH CCHHHHHHHHHCCCEEEECCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHH ELNSRGNRICKRDGAACDIVVAGYENQMQLIAQYIITELPFDRLYFYGKNRPLHVSFGPL HHHHCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEEEECCC HKRYLYVKERDNNGKRNAGKGDKYRYHFGLLKYSPNSNKN CEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA