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The map label for this gene is 119946162

Identifier: 119946162

GI number: 119946162

Start: 3080984

End: 3081793

Strand: Reverse

Name: 119946162

Synonym: Ping_2522

Alternate gene names: NA

Gene position: 3081793-3080984 (Counterclockwise)

Preceding gene: 119946163

Following gene: 119946161

Centisome position: 67.59

GC content: 35.8

Gene sequence:

>810_bases
ATGGATTATAACAGTATGTTAAGTGGGATTGTTGAAGGCCTTCTGAGAACAGCTTTGCAGTGGTGGTATTTGTTTCCAAT
ATTAATATTGGGACTAATAGTTAAAACACCTTGGTTTAAAGGCAAAGCAGGTGAGTTTTTAGTTAATTTTTTACTTAGTA
AATTTATGGATAAAAATAAATACCACTTAATTAAAAATGTTACTTTGCCGACTGATGATGGAACCACCCAGATTGATCAT
ATTGTGGTGTCACAGTTTGGTGTTTTTGTCATAGAAACAAAAAATATGAAGGGCTGGATATTTGGCACCGCCAAACAAAA
ACAGTGGACGCAAAAGATATTCAGATACTCCGGCAAGTTTCAAAACCCATTACACCAGAATTATAAACATACACAAACAT
TAGCAGGCTGTTTAGATGTTCCTTCCGAGTATATTTATTCTGTTGTCGTATTTGTTGGCGATAGTACCTTTAAAACTAAA
ATGCCTGACAATGTGACTTATGCTCGAGGCTGTGTTGCGTATATTAAAAGTAAAAAAGAACTTCATTTTACAGAGGATAA
AATTACCGAAATCGTCACTGCAATTGAAGAGGGCCGATTATCACGAGGTTTGAAAACGAATTTACAACATATAAAGCATG
TGAAAGTAATTGTAGAAGCTAAGCAAGCGCCTAAAGTGATTGAAGAAAAAACATGCCCAAAATGTGGAACCCTGATGATT
TTACGTGAAGCTAAAAAGGGTAAAAATGCGGGTAATCAGTTTTGGGGATGCAGTAATTTCCCACAGTGTAGGACGGTAGT
TGATCACTGA

Upstream 100 bases:

>100_bases
TGAAGATATGCAAACCTTTGCCAGATTGAAAGGGGTTGTACGTTAACGCTATTTGGATGTAATTAATGTTTAAGTTAAGT
GAAAATTAAAGAGGCAGAAA

Downstream 100 bases:

>100_bases
TACAACATATTGTGATGATGAGTTAAAGCAAGAAGGCTGTATATATGTTTCAGTACATGATGATAGCTATTACGAGTTCG
GTTAATAGGAATAAGGATAT

Product: DNA-binding NERD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDYNSMLSGIVEGLLRTALQWWYLFPILILGLIVKTPWFKGKAGEFLVNFLLSKFMDKNKYHLIKNVTLPTDDGTTQIDH
IVVSQFGVFVIETKNMKGWIFGTAKQKQWTQKIFRYSGKFQNPLHQNYKHTQTLAGCLDVPSEYIYSVVVFVGDSTFKTK
MPDNVTYARGCVAYIKSKKELHFTEDKITEIVTAIEEGRLSRGLKTNLQHIKHVKVIVEAKQAPKVIEEKTCPKCGTLMI
LREAKKGKNAGNQFWGCSNFPQCRTVVDH

Sequences:

>Translated_269_residues
MDYNSMLSGIVEGLLRTALQWWYLFPILILGLIVKTPWFKGKAGEFLVNFLLSKFMDKNKYHLIKNVTLPTDDGTTQIDH
IVVSQFGVFVIETKNMKGWIFGTAKQKQWTQKIFRYSGKFQNPLHQNYKHTQTLAGCLDVPSEYIYSVVVFVGDSTFKTK
MPDNVTYARGCVAYIKSKKELHFTEDKITEIVTAIEEGRLSRGLKTNLQHIKHVKVIVEAKQAPKVIEEKTCPKCGTLMI
LREAKKGKNAGNQFWGCSNFPQCRTVVDH
>Mature_269_residues
MDYNSMLSGIVEGLLRTALQWWYLFPILILGLIVKTPWFKGKAGEFLVNFLLSKFMDKNKYHLIKNVTLPTDDGTTQIDH
IVVSQFGVFVIETKNMKGWIFGTAKQKQWTQKIFRYSGKFQNPLHQNYKHTQTLAGCLDVPSEYIYSVVVFVGDSTFKTK
MPDNVTYARGCVAYIKSKKELHFTEDKITEIVTAIEEGRLSRGLKTNLQHIKHVKVIVEAKQAPKVIEEKTCPKCGTLMI
LREAKKGKNAGNQFWGCSNFPQCRTVVDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 NERD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011528 [H]

Pfam domain/function: PF08378 NERD [H]

EC number: NA

Molecular weight: Translated: 30759; Mature: 30759

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYNSMLSGIVEGLLRTALQWWYLFPILILGLIVKTPWFKGKAGEFLVNFLLSKFMDKNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
YHLIKNVTLPTDDGTTQIDHIVVSQFGVFVIETKNMKGWIFGTAKQKQWTQKIFRYSGKF
EEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCC
QNPLHQNYKHTQTLAGCLDVPSEYIYSVVVFVGDSTFKTKMPDNVTYARGCVAYIKSKKE
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEECCCCCCCHHHHHHHHHHHCCCC
LHFTEDKITEIVTAIEEGRLSRGLKTNLQHIKHVKVIVEAKQAPKVIEEKTCPKCGTLMI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHH
LREAKKGKNAGNQFWGCSNFPQCRTVVDH
HHHHHCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MDYNSMLSGIVEGLLRTALQWWYLFPILILGLIVKTPWFKGKAGEFLVNFLLSKFMDKNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
YHLIKNVTLPTDDGTTQIDHIVVSQFGVFVIETKNMKGWIFGTAKQKQWTQKIFRYSGKF
EEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCC
QNPLHQNYKHTQTLAGCLDVPSEYIYSVVVFVGDSTFKTKMPDNVTYARGCVAYIKSKKE
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEECCCCCCCHHHHHHHHHHHCCCC
LHFTEDKITEIVTAIEEGRLSRGLKTNLQHIKHVKVIVEAKQAPKVIEEKTCPKCGTLMI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHH
LREAKKGKNAGNQFWGCSNFPQCRTVVDH
HHHHHCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10515943; 12004073 [H]