| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mptN [H]
Identifier: 119946109
GI number: 119946109
Start: 3008156
End: 3009118
Strand: Reverse
Name: mptN [H]
Synonym: Ping_2459
Alternate gene names: 119946109
Gene position: 3009118-3008156 (Counterclockwise)
Preceding gene: 119946111
Following gene: 119946108
Centisome position: 66.0
GC content: 35.93
Gene sequence:
>963_bases ATGAGTAGTAATAAAAGGATAGGCTCAGAACCAACGGTTGGAATATGGTTATATAAAAACGGTGGGGGGATTGAAATACA GCAAAAATTAATCGAGATTCTTACAAAAAAAGGCATAAGGACCATAACAGATCTCAATCTCGGACATGCTTATGCATCTG GAGGTGAAATTATTTGTAACGGTATTAATATGGAAAACTTAAACGCTTTTTTCTCCTATAATGCAGGAGAGCAATCAACC TTTCAATTATATATGTATCAATTACTTAATCAAACGACTTCTACCCTTAATAATTATGATGCTTTTGCTTTGACTGAAGA TAAGTTTTTAACCGCTCATGCATTAAATCATGCCGGAATAAGAACAGCTGAATATCGCATGATTCATTGTGATGATATTT CATTATTAAAAAAAACAGTCAGTGATTGGCAAGGCCAAGTTGTCTATAAGCCGACCGATGGCTGGGGAGGGAACGGACTC GTTAAGATAGAAGACGAAAGTGCACTCGATGTTTTAATCCCCTTTTTAAACCGGATGGGTTTGGAAAACCTTTATTTAGA AAAATATATTAATTATGACAAAACAGATTGGCGAGTCGATATTGTTAATGGTGAATTTGTAGGCTGTTATGGCCGTAGCG CGCCAGAAGGTGATTGGAAAACTAATATTACCAGCGGCGGTTCTATTTTATTACGGGAACCTAAAGATGATGTTATTGAG TTAGCTATCAAAGCGGCAAAAGTCACTGGGCTTGAAATTGCAGGTGTTGATTTATTATATGATTTAGATACCGAAGAATA TGTGGTGCTTGAAGTGAATGGGATACCCGCATTTGCAACACCAGAGCAAGAAAAAATAGGGCTAAATTTTAATGACTTTA AAATTAATAAAATAGCCAATATGATAGAAAGTATTATAGAGGGTGAGCAGAGTGAAAAAAGCCACACAAAAATCGTTGCC TAA
Upstream 100 bases:
>100_bases TACTTGATATAAATGTATAGGTGGAGCGTTTTATTTAATCATAAAAATATCTAGCATTATTTATACAACGAGATGTACTT CGAAACGGGGCAATCAAATA
Downstream 100 bases:
>100_bases AATTGGTTTATTATATTTAGACCATGTCTTACGGTTTTTTGATAAATCAAATTTTAAAGGTTGGCCTGATAAAATAGAAA GCGTTGTTTACCATTGGCGA
Product: RimK domain-containing protein ATP-grasp
Products: NA
Alternate protein names: H(4)MPT:alpha-L-glutamate ligase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSSNKRIGSEPTVGIWLYKNGGGIEIQQKLIEILTKKGIRTITDLNLGHAYASGGEIICNGINMENLNAFFSYNAGEQST FQLYMYQLLNQTTSTLNNYDAFALTEDKFLTAHALNHAGIRTAEYRMIHCDDISLLKKTVSDWQGQVVYKPTDGWGGNGL VKIEDESALDVLIPFLNRMGLENLYLEKYINYDKTDWRVDIVNGEFVGCYGRSAPEGDWKTNITSGGSILLREPKDDVIE LAIKAAKVTGLEIAGVDLLYDLDTEEYVVLEVNGIPAFATPEQEKIGLNFNDFKINKIANMIESIIEGEQSEKSHTKIVA
Sequences:
>Translated_320_residues MSSNKRIGSEPTVGIWLYKNGGGIEIQQKLIEILTKKGIRTITDLNLGHAYASGGEIICNGINMENLNAFFSYNAGEQST FQLYMYQLLNQTTSTLNNYDAFALTEDKFLTAHALNHAGIRTAEYRMIHCDDISLLKKTVSDWQGQVVYKPTDGWGGNGL VKIEDESALDVLIPFLNRMGLENLYLEKYINYDKTDWRVDIVNGEFVGCYGRSAPEGDWKTNITSGGSILLREPKDDVIE LAIKAAKVTGLEIAGVDLLYDLDTEEYVVLEVNGIPAFATPEQEKIGLNFNDFKINKIANMIESIIEGEQSEKSHTKIVA >Mature_319_residues SSNKRIGSEPTVGIWLYKNGGGIEIQQKLIEILTKKGIRTITDLNLGHAYASGGEIICNGINMENLNAFFSYNAGEQSTF QLYMYQLLNQTTSTLNNYDAFALTEDKFLTAHALNHAGIRTAEYRMIHCDDISLLKKTVSDWQGQVVYKPTDGWGGNGLV KIEDESALDVLIPFLNRMGLENLYLEKYINYDKTDWRVDIVNGEFVGCYGRSAPEGDWKTNITSGGSILLREPKDDVIEL AIKAAKVTGLEIAGVDLLYDLDTEEYVVLEVNGIPAFATPEQEKIGLNFNDFKINKIANMIESIIEGEQSEKSHTKIVA
Specific function: Catalyzes the ATP or GTP-dependent addition of one L- glutamate molecule to tetrahydromethanopterin, producing tetrahydrosarcinapterin [H]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1787076, Length=200, Percent_Identity=29.5, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR004666 [H]
Pfam domain/function: PF08443 RimK [H]
EC number: NA
Molecular weight: Translated: 35652; Mature: 35521
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNKRIGSEPTVGIWLYKNGGGIEIQQKLIEILTKKGIRTITDLNLGHAYASGGEIICN CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCEEEE GINMENLNAFFSYNAGEQSTFQLYMYQLLNQTTSTLNNYDAFALTEDKFLTAHALNHAGI CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHCCCCC RTAEYRMIHCDDISLLKKTVSDWQGQVVYKPTDGWGGNGLVKIEDESALDVLIPFLNRMG EEEEEEEEEECCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCC LENLYLEKYINYDKTDWRVDIVNGEFVGCYGRSAPEGDWKTNITSGGSILLREPKDDVIE CHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHH LAIKAAKVTGLEIAGVDLLYDLDTEEYVVLEVNGIPAFATPEQEKIGLNFNDFKINKIAN HHHHHHHCCCEEEECEEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHHH MIESIIEGEQSEKSHTKIVA HHHHHHCCCCCCCCCCEECC >Mature Secondary Structure SSNKRIGSEPTVGIWLYKNGGGIEIQQKLIEILTKKGIRTITDLNLGHAYASGGEIICN CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCEEEE GINMENLNAFFSYNAGEQSTFQLYMYQLLNQTTSTLNNYDAFALTEDKFLTAHALNHAGI CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHCCCCC RTAEYRMIHCDDISLLKKTVSDWQGQVVYKPTDGWGGNGLVKIEDESALDVLIPFLNRMG EEEEEEEEEECCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCC LENLYLEKYINYDKTDWRVDIVNGEFVGCYGRSAPEGDWKTNITSGGSILLREPKDDVIE CHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHH LAIKAAKVTGLEIAGVDLLYDLDTEEYVVLEVNGIPAFATPEQEKIGLNFNDFKINKIAN HHHHHHHCCCEEEECEEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHHH MIESIIEGEQSEKSHTKIVA HHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Glu; Ribosomal protein S6 [C]
Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]
General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]