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The map label for this gene is dppC [H]

Identifier: 119946071

GI number: 119946071

Start: 2966786

End: 2967652

Strand: Direct

Name: dppC [H]

Synonym: Ping_2420

Alternate gene names: 119946071

Gene position: 2966786-2967652 (Clockwise)

Preceding gene: 119946070

Following gene: 119946072

Centisome position: 65.07

GC content: 43.14

Gene sequence:

>867_bases
ATGAATAGCGTGACTATAGCTCAAGAAAACTTAATACAACGCCTGTGGTATTTAGCACGCAAAAATCCACTTTCTTTACT
TTCATTAGCACTCTTTGGTATGTATGTTTTTGTCGCGTTAACCGCTAATTACTGGGTGCCCTTTGAACCCCTTAAGAGTA
ATACGGCTATTGCTCTAGAAGCGCCAAATTTAATTCATTTATTTGGTACTGATCACCTTGGCAGAGATGTATTTTCGCGA
GTAATGGTCGCAACGCGCCTTGATCTTGGCATTGCAGTCTATGCCGTTTCTATCAGTTTTGTAATAGGTACCACACTTGG
CAGTATTGCTGCCTATTTTGGTGGCTGGTATGAACGAATTATTGGCCGGGTAGCTGATATTGTACTGGCGTTTCCACTTT
TCGTTCTGGCAATGGGGATAGTGGCGGTGATGGGGAATTCACTGATAAACGTCATTTATGCGACAGCTATTATTAATATT
CCATTTTATATCCGTATCGCCCGGGCTGAAGTCAGTATCCAACGTGATCGGCAATATGTTCAGGCCGCATTGTTGTCGGG
TAATAGCCATATGCGTACGTTACTTTATCATATTTTCCCTAACTGTTTACCAAATCTAGTGGTACAGATATCGACCAATA
TGGGCTGGGCAATTCTAAATGCGGCGGGTTTGTCATTTATTGGTTTAGGTGTACGCCCTCCTGCAGCAGAGTGGGGGATT
TTAGTCGCAGAGGGAGCCGATTACATTATTTCAGGTCAATGGTGGTTGGTACTTTTCCCCGGCTTGATTCTTATGTTAGC
AGTGTTTAGTTTTAACCTGCTTGGTGACACTTTACGTGATCTGGTTGACCCGCAGAAAAGGAGCTAA

Upstream 100 bases:

>100_bases
GCAATTCAAGGGTTTGTCCTTATTATGGCGGTATTGTTTGTCTCTCTTAATCTTATTATTGACATTCTTTACACACTCTT
TGATCCAAGGATGGGACGTA

Downstream 100 bases:

>100_bases
TAATGCATAAGCATAAGCAGAAACAGAAGCATAACAATAATAACAAAGGTGTCTTACTCAGTATCAGTAATCTGTCTATC
GATTTTGAAACGAGTAAGGG

Product: dipeptide ABC transport system inner membrane binding component DppC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNSVTIAQENLIQRLWYLARKNPLSLLSLALFGMYVFVALTANYWVPFEPLKSNTAIALEAPNLIHLFGTDHLGRDVFSR
VMVATRLDLGIAVYAVSISFVIGTTLGSIAAYFGGWYERIIGRVADIVLAFPLFVLAMGIVAVMGNSLINVIYATAIINI
PFYIRIARAEVSIQRDRQYVQAALLSGNSHMRTLLYHIFPNCLPNLVVQISTNMGWAILNAAGLSFIGLGVRPPAAEWGI
LVAEGADYIISGQWWLVLFPGLILMLAVFSFNLLGDTLRDLVDPQKRS

Sequences:

>Translated_288_residues
MNSVTIAQENLIQRLWYLARKNPLSLLSLALFGMYVFVALTANYWVPFEPLKSNTAIALEAPNLIHLFGTDHLGRDVFSR
VMVATRLDLGIAVYAVSISFVIGTTLGSIAAYFGGWYERIIGRVADIVLAFPLFVLAMGIVAVMGNSLINVIYATAIINI
PFYIRIARAEVSIQRDRQYVQAALLSGNSHMRTLLYHIFPNCLPNLVVQISTNMGWAILNAAGLSFIGLGVRPPAAEWGI
LVAEGADYIISGQWWLVLFPGLILMLAVFSFNLLGDTLRDLVDPQKRS
>Mature_288_residues
MNSVTIAQENLIQRLWYLARKNPLSLLSLALFGMYVFVALTANYWVPFEPLKSNTAIALEAPNLIHLFGTDHLGRDVFSR
VMVATRLDLGIAVYAVSISFVIGTTLGSIAAYFGGWYERIIGRVADIVLAFPLFVLAMGIVAVMGNSLINVIYATAIINI
PFYIRIARAEVSIQRDRQYVQAALLSGNSHMRTLLYHIFPNCLPNLVVQISTNMGWAILNAAGLSFIGLGVRPPAAEWGI
LVAEGADYIISGQWWLVLFPGLILMLAVFSFNLLGDTLRDLVDPQKRS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=39.7058823529412, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=37.9061371841155, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789964, Length=283, Percent_Identity=39.2226148409894, Blast_Score=187, Evalue=9e-49,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=38.7755102040816, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787498, Length=284, Percent_Identity=31.3380281690141, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787549, Length=212, Percent_Identity=33.0188679245283, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788505, Length=255, Percent_Identity=23.1372549019608, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31762; Mature: 31762

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVTIAQENLIQRLWYLARKNPLSLLSLALFGMYVFVALTANYWVPFEPLKSNTAIALE
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
APNLIHLFGTDHLGRDVFSRVMVATRLDLGIAVYAVSISFVIGTTLGSIAAYFGGWYERI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRVADIVLAFPLFVLAMGIVAVMGNSLINVIYATAIINIPFYIRIARAEVSIQRDRQYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
QAALLSGNSHMRTLLYHIFPNCLPNLVVQISTNMGWAILNAAGLSFIGLGVRPPAAEWGI
HHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCHHEEECCCCCCCCCCCE
LVAEGADYIISGQWWLVLFPGLILMLAVFSFNLLGDTLRDLVDPQKRS
EEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSVTIAQENLIQRLWYLARKNPLSLLSLALFGMYVFVALTANYWVPFEPLKSNTAIALE
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
APNLIHLFGTDHLGRDVFSRVMVATRLDLGIAVYAVSISFVIGTTLGSIAAYFGGWYERI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRVADIVLAFPLFVLAMGIVAVMGNSLINVIYATAIINIPFYIRIARAEVSIQRDRQYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
QAALLSGNSHMRTLLYHIFPNCLPNLVVQISTNMGWAILNAAGLSFIGLGVRPPAAEWGI
HHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCHHEEECCCCCCCCCCCE
LVAEGADYIISGQWWLVLFPGLILMLAVFSFNLLGDTLRDLVDPQKRS
EEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]