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The map label for this gene is rsbQ [H]

Identifier: 119945969

GI number: 119945969

Start: 2808351

End: 2809163

Strand: Reverse

Name: rsbQ [H]

Synonym: Ping_2309

Alternate gene names: 119945969

Gene position: 2809163-2808351 (Counterclockwise)

Preceding gene: 119945970

Following gene: 119945968

Centisome position: 61.61

GC content: 42.8

Gene sequence:

>813_bases
ATGAATATCATCAATAGGAACAATGTCAGAGTATGCGGTAAAGGCGCTAAAACAATTGTGTTTGCCCATGGCTATGGTTG
TGATCAATCTATGTGGCGTAGAGTCAGTCCGTCCTTTGAAGATGAATATAGGGTGGTATTATTTGACTATGTTGGCGTAG
GTTTGTCTAATGCTGATGCTTATGATCCAGTGCGTTATTCAAGTTTGGCCGGTTATGCCAAAGATATTGTCGAGATTTTT
ACAGCACTTGATTTGCAAGATGCGATCTTGGTAGGGCATTCAGTCAGCAGTATGATTAGCTTGTTAGCTGCAATCAAAAT
TCCCCATAGAATCTCAAAGTTGATCATGATTTGCCCAACCCCATGCTATTTGAACGACCGACCCGATTACATAGGTGGCT
TTGAACAGGCCGACATTGAGGGTTTGCTAGATATAATCGATCGCAATCAACCAGGTTGGGCAGCTCATCTCGCCGGTATT
GTTGTAAATAACCCCGATCAACCAGAATTGGCACAAGAACTGGAAGTCAATTTTTGTGCCATGGATCCCGCCATAGCTAA
GCGTTTTGCTAAAGCAACTTTTTTGGCGGATAACCGTTCTGATCTGGTTGGTTTTGACAAGCCCTGTTTGATTCTTCAGT
GCCAGGAAGATTTAGTTGCACCGAATGTCGTAGGCGATTATTTACATCAACATTTGCTTAATAGTCACTTGCAGCAGATG
AAAGCGACCGGACACTGCCCCCATATGAGTCATCCGCTGGAAACCATCGAATTGATCAAAAAATACCTTGCCAGTAATGT
AAAGCAGAACTAA

Upstream 100 bases:

>100_bases
AAAAAAATACCCTTCGCACTTGCTTTTTTCATGTAGCTTAGAGACCAACGATTTGAAAAATAGATGTTTATGCTCCTTTC
AACAATGAGATAAAACCACG

Downstream 100 bases:

>100_bases
AGAGTGGATATTTAAAGTGGACATTTCAAAATTTAATCTTCATGAGGCACCCTGTGGCTTGTTTATCTTTGATAACAGCT
TAAAGATAATGACGGCTAAT

Product: alpha/beta hydrolase fold

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNIINRNNVRVCGKGAKTIVFAHGYGCDQSMWRRVSPSFEDEYRVVLFDYVGVGLSNADAYDPVRYSSLAGYAKDIVEIF
TALDLQDAILVGHSVSSMISLLAAIKIPHRISKLIMICPTPCYLNDRPDYIGGFEQADIEGLLDIIDRNQPGWAAHLAGI
VVNNPDQPELAQELEVNFCAMDPAIAKRFAKATFLADNRSDLVGFDKPCLILQCQEDLVAPNVVGDYLHQHLLNSHLQQM
KATGHCPHMSHPLETIELIKKYLASNVKQN

Sequences:

>Translated_270_residues
MNIINRNNVRVCGKGAKTIVFAHGYGCDQSMWRRVSPSFEDEYRVVLFDYVGVGLSNADAYDPVRYSSLAGYAKDIVEIF
TALDLQDAILVGHSVSSMISLLAAIKIPHRISKLIMICPTPCYLNDRPDYIGGFEQADIEGLLDIIDRNQPGWAAHLAGI
VVNNPDQPELAQELEVNFCAMDPAIAKRFAKATFLADNRSDLVGFDKPCLILQCQEDLVAPNVVGDYLHQHLLNSHLQQM
KATGHCPHMSHPLETIELIKKYLASNVKQN
>Mature_270_residues
MNIINRNNVRVCGKGAKTIVFAHGYGCDQSMWRRVSPSFEDEYRVVLFDYVGVGLSNADAYDPVRYSSLAGYAKDIVEIF
TALDLQDAILVGHSVSSMISLLAAIKIPHRISKLIMICPTPCYLNDRPDYIGGFEQADIEGLLDIIDRNQPGWAAHLAGI
VVNNPDQPELAQELEVNFCAMDPAIAKRFAKATFLADNRSDLVGFDKPCLILQCQEDLVAPNVVGDYLHQHLLNSHLQQM
KATGHCPHMSHPLETIELIKKYLASNVKQN

Specific function: Positive regulator required for energy stress activation of the sigma-B transcription factor. Could be required for rsbP phosphatase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 29995; Mature: 29995

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00308 LECTIN_LEGUME_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIINRNNVRVCGKGAKTIVFAHGYGCDQSMWRRVSPSFEDEYRVVLFDYVGVGLSNADA
CCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
YDPVRYSSLAGYAKDIVEIFTALDLQDAILVGHSVSSMISLLAAIKIPHRISKLIMICPT
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHEEEECCC
PCYLNDRPDYIGGFEQADIEGLLDIIDRNQPGWAAHLAGIVVNNPDQPELAQELEVNFCA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCHHHHHHHCCHHEE
MDPAIAKRFAKATFLADNRSDLVGFDKPCLILQCQEDLVAPNVVGDYLHQHLLNSHLQQM
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHH
KATGHCPHMSHPLETIELIKKYLASNVKQN
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIINRNNVRVCGKGAKTIVFAHGYGCDQSMWRRVSPSFEDEYRVVLFDYVGVGLSNADA
CCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
YDPVRYSSLAGYAKDIVEIFTALDLQDAILVGHSVSSMISLLAAIKIPHRISKLIMICPT
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHEEEECCC
PCYLNDRPDYIGGFEQADIEGLLDIIDRNQPGWAAHLAGIVVNNPDQPELAQELEVNFCA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCHHHHHHHCCHHEE
MDPAIAKRFAKATFLADNRSDLVGFDKPCLILQCQEDLVAPNVVGDYLHQHLLNSHLQQM
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHH
KATGHCPHMSHPLETIELIKKYLASNVKQN
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888; 11591687 [H]