| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945908
Identifier: 119945908
GI number: 119945908
Start: 2732349
End: 2732756
Strand: Reverse
Name: 119945908
Synonym: Ping_2248
Alternate gene names: NA
Gene position: 2732756-2732349 (Counterclockwise)
Preceding gene: 119945909
Following gene: 119945907
Centisome position: 59.93
GC content: 36.52
Gene sequence:
>408_bases ATGCGCATTGAAGTTAACGGTATTGATCATCTTGTTCTCAGAACGACAAAAATGGCTGAAATGTTAACTTTTTATTGTCA AATTCTAGGTTGTTGTATTGAAAGGGAAACGTCACCAGAAACAGGGTTGATTCAGTTACGTGCAGGTAATGCTTTAATTG ATTTAGTCTCTGTTGATAGTGAATTAGGTCATCTCGGTGGTGGTGCTGCTACTCATACAGAAAACAATATGGATCATTTT TGTTTGCAAATAAAAGCCATGCCGGAAGAAGAGATTAGCAGATATTTATTAAGTTTTGGCCTTATTGTTGAGCCGTTTAC CAGGCGATATGGCGCACAAGGATTTGGTAACTCTATTTACATTAATGATCCCGAGGGCAATACTGTCGAGATAAAAAATA AAATTTAA
Upstream 100 bases:
>100_bases CTATCTTTTTTTTAAGCAATATTTATGCGAAATTCCATGCGAAGTTCAGTTTGTAACCTTGCATAAATTGCAGATATCTA TAAAGGCGGTGAATGTGAAA
Downstream 100 bases:
>100_bases AGTAGATTATACTGATTCCAGAAAAATACGGTATTAGGTATTAGGTATTAGGTATTAGGTATTAGGTATTAGGTAGTTAG GCAGTGATAAGTCACTATAC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Methylmalonyl CoA Epimerase; Dioxygenase Protein; Glyoxalase; Dioxygenase; Glyoxalase/Bleomycin Resistance
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRIEVNGIDHLVLRTTKMAEMLTFYCQILGCCIERETSPETGLIQLRAGNALIDLVSVDSELGHLGGGAATHTENNMDHF CLQIKAMPEEEISRYLLSFGLIVEPFTRRYGAQGFGNSIYINDPEGNTVEIKNKI
Sequences:
>Translated_135_residues MRIEVNGIDHLVLRTTKMAEMLTFYCQILGCCIERETSPETGLIQLRAGNALIDLVSVDSELGHLGGGAATHTENNMDHF CLQIKAMPEEEISRYLLSFGLIVEPFTRRYGAQGFGNSIYINDPEGNTVEIKNKI >Mature_135_residues MRIEVNGIDHLVLRTTKMAEMLTFYCQILGCCIERETSPETGLIQLRAGNALIDLVSVDSELGHLGGGAATHTENNMDHF CLQIKAMPEEEISRYLLSFGLIVEPFTRRYGAQGFGNSIYINDPEGNTVEIKNKI
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15019; Mature: 15019
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIEVNGIDHLVLRTTKMAEMLTFYCQILGCCIERETSPETGLIQLRAGNALIDLVSVDS CEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCC ELGHLGGGAATHTENNMDHFCLQIKAMPEEEISRYLLSFGLIVEPFTRRYGAQGFGNSIY HHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHCHHHHHCCCCCCCCEEE INDPEGNTVEIKNKI EECCCCCEEEEECCC >Mature Secondary Structure MRIEVNGIDHLVLRTTKMAEMLTFYCQILGCCIERETSPETGLIQLRAGNALIDLVSVDS CEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCC ELGHLGGGAATHTENNMDHFCLQIKAMPEEEISRYLLSFGLIVEPFTRRYGAQGFGNSIY HHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHCHHHHHCCCCCCCCEEE INDPEGNTVEIKNKI EECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA