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The map label for this gene is ybgI [C]

Identifier: 119945890

GI number: 119945890

Start: 2713218

End: 2713973

Strand: Reverse

Name: ybgI [C]

Synonym: Ping_2230

Alternate gene names: 119945890

Gene position: 2713973-2713218 (Counterclockwise)

Preceding gene: 119945891

Following gene: 119945889

Centisome position: 59.52

GC content: 42.72

Gene sequence:

>756_bases
ATGAATAATCAAAAACTTGCCAATAAATTAGATCAATTTTTAGAAATTCATCAGTTTAAAGATTACTGTCCAAATGGTTT
ACAAGTTGAAGGTAAGCCGGAAGTTAAAAAGATAATTACCGGCGTCACTGCCTGCCAGGCATTAATCGATATCGCCGCTC
TCGATGATGCCGATGCCATTTTGGTTCATCACGGTTTTTTTTGGAAAGGGGAAGGGCCGGAGATAGTCGGCATGAAATAT
AAGCGTATCAAGGCCCTGATGGATAAAGGGATTAACCTTTATGCGTATCATTTACCGCTTGATGTACACCCAGAATTGGG
TAATAACGCCCAATTGGCAACATTATTGGGCATTACTGACCGTCGTCCGTTAGAGCCATGGGATAAGCGCTGTGTCGCTC
GAGTGGGTAAATTTGAACAGGCGATAAGTCCCGAGCAATTATCCGCACGTATTGAATCCGTATTAGCACGTAAACCCCTG
CATATTGATGGCGGGAAAAAAGAGATAAAAACGATTGCCTGGTGTACCGGGGGTGGTCAAGATTATATTACTATCGCGGC
TGAGCAGGGCATTGATGCTTTTATTACTGGTGAGGTTTCTGAGCGTACCGTGCATATTGCAAGAGAAATGGGCATTCATT
TTTATGCAGCGGGCCATCATGCAACGGAACGTTATGGGGTAAAAGCCCTGGGTGAATGGTTAGCAGGCGAGTTTGATTTT
GATGTTAAATTTATAGATATTGAAAATCCAGTTTAA

Upstream 100 bases:

>100_bases
ATAGAAAAATAAAACAGACTATCGTTATCAAACAAGACAGAATGAAGCATAAATAACGTTATACTTTTTAAAAATAAAAA
TTTAATCTACTGGAGTGCCT

Downstream 100 bases:

>100_bases
TCTGCCTGCTTACCTAACAAAATCAAACAAATTTAACTAAAAAAGCCCTCCTAGGTTTGAAACTAGGGGGGCTTTTACTT
ATGATACTTTACAAAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNNQKLANKLDQFLEIHQFKDYCPNGLQVEGKPEVKKIITGVTACQALIDIAALDDADAILVHHGFFWKGEGPEIVGMKY
KRIKALMDKGINLYAYHLPLDVHPELGNNAQLATLLGITDRRPLEPWDKRCVARVGKFEQAISPEQLSARIESVLARKPL
HIDGGKKEIKTIAWCTGGGQDYITIAAEQGIDAFITGEVSERTVHIAREMGIHFYAAGHHATERYGVKALGEWLAGEFDF
DVKFIDIENPV

Sequences:

>Translated_251_residues
MNNQKLANKLDQFLEIHQFKDYCPNGLQVEGKPEVKKIITGVTACQALIDIAALDDADAILVHHGFFWKGEGPEIVGMKY
KRIKALMDKGINLYAYHLPLDVHPELGNNAQLATLLGITDRRPLEPWDKRCVARVGKFEQAISPEQLSARIESVLARKPL
HIDGGKKEIKTIAWCTGGGQDYITIAAEQGIDAFITGEVSERTVHIAREMGIHFYAAGHHATERYGVKALGEWLAGEFDF
DVKFIDIENPV
>Mature_251_residues
MNNQKLANKLDQFLEIHQFKDYCPNGLQVEGKPEVKKIITGVTACQALIDIAALDDADAILVHHGFFWKGEGPEIVGMKY
KRIKALMDKGINLYAYHLPLDVHPELGNNAQLATLLGITDRRPLEPWDKRCVARVGKFEQAISPEQLSARIESVLARKPL
HIDGGKKEIKTIAWCTGGGQDYITIAAEQGIDAFITGEVSERTVHIAREMGIHFYAAGHHATERYGVKALGEWLAGEFDF
DVKFIDIENPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=254, Percent_Identity=56.2992125984252, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27958; Mature: 27958

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQKLANKLDQFLEIHQFKDYCPNGLQVEGKPEVKKIITGVTACQALIDIAALDDADAI
CCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LVHHGFFWKGEGPEIVGMKYKRIKALMDKGINLYAYHLPLDVHPELGNNAQLATLLGITD
EEECCEEEECCCCEEECHHHHHHHHHHHCCCEEEEEEECEEECCCCCCCCEEEEEEECCC
RRPLEPWDKRCVARVGKFEQAISPEQLSARIESVLARKPLHIDGGKKEIKTIAWCTGGGQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCHHHEEEEEEEECCCC
DYITIAAEQGIDAFITGEVSERTVHIAREMGIHFYAAGHHATERYGVKALGEWLAGEFDF
EEEEEEECCCCCEEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC
DVKFIDIENPV
EEEEEECCCCC
>Mature Secondary Structure
MNNQKLANKLDQFLEIHQFKDYCPNGLQVEGKPEVKKIITGVTACQALIDIAALDDADAI
CCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LVHHGFFWKGEGPEIVGMKYKRIKALMDKGINLYAYHLPLDVHPELGNNAQLATLLGITD
EEECCEEEECCCCEEECHHHHHHHHHHHCCCEEEEEEECEEECCCCCCCCEEEEEEECCC
RRPLEPWDKRCVARVGKFEQAISPEQLSARIESVLARKPLHIDGGKKEIKTIAWCTGGGQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCHHHEEEEEEEECCCC
DYITIAAEQGIDAFITGEVSERTVHIAREMGIHFYAAGHHATERYGVKALGEWLAGEFDF
EEEEEEECCCCCEEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC
DVKFIDIENPV
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]