| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945791
Identifier: 119945791
GI number: 119945791
Start: 2592768
End: 2593757
Strand: Reverse
Name: 119945791
Synonym: Ping_2127
Alternate gene names: NA
Gene position: 2593757-2592768 (Counterclockwise)
Preceding gene: 119945792
Following gene: 119945790
Centisome position: 56.89
GC content: 46.57
Gene sequence:
>990_bases ATGTACCAGAAACAGATTGTGATTGATGGGCTGCAGTACTGCAATTGGGACCGGGAGTATTTTAAAACGCTTCAAGCCAG CGGTATTACAGCGGTCCATGCGACCATGGTTTATCACGAAAATGCGCGTGAAACACTGACTCGCTTTGCACAGTGGAATC TAAGGTTCGAGCAAAATTCAGATTTAATTATGCCTGTTCTGTCTATGGCGGATGTAGAAAAAGCGAAGTCTTTAGGTAAA GTGGGGATTTACTTTGGTGCTCAAAACTGTTCTCCAATAGACGATGAAATCGGTTTGATTGAAGTGATGCGTAAACAAGG CCTGCTGATCATGCAGCTTACTTACAACAACCAAAGTCTGCTGGGGACAGGCTGCTATGAGCAGCACGATACGGGTATTA CGCGTTTTGGCAGGCAAGCTATCACCGAGATGAACCGCGTGGGCATGATTATTGATATGTCGCACAGTGCTGAACGTTCA ACACTTGAGGCGATTGATTTATCTACGCGGCCAATCTGTATCAGCCACGCGAATCCAATCTTTGCCCACGATGCACTGCG TAATAAATCGAATGATGTGATTAAAGCGCTGAGTGCGCGTGGTGGCTTAATTGGTTTTAGCTTATATCCATTCCACTTAC CAAATGGCAGTCAATGCAGCTTAGAAAATTTCTGTCAAATGGTGGCCACAACTGCAGATATGGTCGGCGTTGAGCACTTG GGTATTGGCAGTGATTTGTGTCTAAATCAACCGCAGGAAGTGCTGGAGTGGATGCGTAATGGGCGCTGGTCAAAGACGAT GGATTACGGAGAAGGTTCAGCAAGCAATTCACGCTGGCCGAACGCGCTTCCCTGGTTCTGTGGAAGCGCGGGCATGGAGA ATATCTACAACGGATTAATGCGTCACGGATTCAGTGAATCTGAGACTGGGCAAATATTGGGCGGGAACTGGTTTAACTTC CTAAAACAGGGATTAGAGCCTATTTCGTAA
Upstream 100 bases:
>100_bases AGTTCTACACCATAGTGAAAACAGCTTATCAACGTCCTTATTAAACGTTTTCTGTAACTAGGTTTTTCAGTAACACGATA AATTGTATTAAGGGGTGGTT
Downstream 100 bases:
>100_bases CGTTGCAGTCCAAACACGGAACAGTCTGCCCAATATGAAAGTAATAGACAGCTGTTAAATATAACTCTTGTAGTCATCAT CTATATGGCAGCTGCAAAGA
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: Peptidase; Dipeptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Zn-Dependent Dipeptidase; Glutamine Amidotransferase; Microsomal Dipeptidase; M19 Family Peptidase; Dipeptidase Protein; Twin-Arginine Translocation Pathway Signal; Thermostable Dipeptidase; Renal Dipeptidase; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Membrane Dipeptidase Family; Multidrug Resistance Protein B; Renal Dipeptidase Superfamily Protein; Periplasmic Dipeptidase; Renal Dipeptidase Superfamily; Dipeptidase Family Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase-Like Protein; M19 Family Membrane Dipeptidase; Microsomal Dipeptidase Like Protein; LOW QUALITY PROTEIN Dipeptidase; Membrane-Bound Dipeptidase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MYQKQIVIDGLQYCNWDREYFKTLQASGITAVHATMVYHENARETLTRFAQWNLRFEQNSDLIMPVLSMADVEKAKSLGK VGIYFGAQNCSPIDDEIGLIEVMRKQGLLIMQLTYNNQSLLGTGCYEQHDTGITRFGRQAITEMNRVGMIIDMSHSAERS TLEAIDLSTRPICISHANPIFAHDALRNKSNDVIKALSARGGLIGFSLYPFHLPNGSQCSLENFCQMVATTADMVGVEHL GIGSDLCLNQPQEVLEWMRNGRWSKTMDYGEGSASNSRWPNALPWFCGSAGMENIYNGLMRHGFSESETGQILGGNWFNF LKQGLEPIS
Sequences:
>Translated_329_residues MYQKQIVIDGLQYCNWDREYFKTLQASGITAVHATMVYHENARETLTRFAQWNLRFEQNSDLIMPVLSMADVEKAKSLGK VGIYFGAQNCSPIDDEIGLIEVMRKQGLLIMQLTYNNQSLLGTGCYEQHDTGITRFGRQAITEMNRVGMIIDMSHSAERS TLEAIDLSTRPICISHANPIFAHDALRNKSNDVIKALSARGGLIGFSLYPFHLPNGSQCSLENFCQMVATTADMVGVEHL GIGSDLCLNQPQEVLEWMRNGRWSKTMDYGEGSASNSRWPNALPWFCGSAGMENIYNGLMRHGFSESETGQILGGNWFNF LKQGLEPIS >Mature_329_residues MYQKQIVIDGLQYCNWDREYFKTLQASGITAVHATMVYHENARETLTRFAQWNLRFEQNSDLIMPVLSMADVEKAKSLGK VGIYFGAQNCSPIDDEIGLIEVMRKQGLLIMQLTYNNQSLLGTGCYEQHDTGITRFGRQAITEMNRVGMIIDMSHSAERS TLEAIDLSTRPICISHANPIFAHDALRNKSNDVIKALSARGGLIGFSLYPFHLPNGSQCSLENFCQMVATTADMVGVEHL GIGSDLCLNQPQEVLEWMRNGRWSKTMDYGEGSASNSRWPNALPWFCGSAGMENIYNGLMRHGFSESETGQILGGNWFNF LKQGLEPIS
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI189458885, Length=187, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4758190, Length=187, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI11641269, Length=190, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI281362638, Length=185, Percent_Identity=24.3243243243243, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI281362636, Length=185, Percent_Identity=24.3243243243243, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI161083233, Length=177, Percent_Identity=24.2937853107345, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221475880, Length=154, Percent_Identity=25.3246753246753, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36827; Mature: 36827
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQKQIVIDGLQYCNWDREYFKTLQASGITAVHATMVYHENARETLTRFAQWNLRFEQNS CCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCEEEECCC DLIMPVLSMADVEKAKSLGKVGIYFGAQNCSPIDDEIGLIEVMRKQGLLIMQLTYNNQSL CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCE LGTGCYEQHDTGITRFGRQAITEMNRVGMIIDMSHSAERSTLEAIDLSTRPICISHANPI EECCCCHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCH FAHDALRNKSNDVIKALSARGGLIGFSLYPFHLPNGSQCSLENFCQMVATTADMVGVEHL HHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC GIGSDLCLNQPQEVLEWMRNGRWSKTMDYGEGSASNSRWPNALPWFCGSAGMENIYNGLM CCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RHGFSESETGQILGGNWFNFLKQGLEPIS HCCCCCCCCCCEECCHHHHHHHHCCCCCC >Mature Secondary Structure MYQKQIVIDGLQYCNWDREYFKTLQASGITAVHATMVYHENARETLTRFAQWNLRFEQNS CCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCEEEECCC DLIMPVLSMADVEKAKSLGKVGIYFGAQNCSPIDDEIGLIEVMRKQGLLIMQLTYNNQSL CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCE LGTGCYEQHDTGITRFGRQAITEMNRVGMIIDMSHSAERSTLEAIDLSTRPICISHANPI EECCCCHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCH FAHDALRNKSNDVIKALSARGGLIGFSLYPFHLPNGSQCSLENFCQMVATTADMVGVEHL HHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC GIGSDLCLNQPQEVLEWMRNGRWSKTMDYGEGSASNSRWPNALPWFCGSAGMENIYNGLM CCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RHGFSESETGQILGGNWFNFLKQGLEPIS HCCCCCCCCCCEECCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA