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The map label for this gene is 119945781

Identifier: 119945781

GI number: 119945781

Start: 2576404

End: 2577450

Strand: Reverse

Name: 119945781

Synonym: Ping_2117

Alternate gene names: NA

Gene position: 2577450-2576404 (Counterclockwise)

Preceding gene: 119945783

Following gene: 119945780

Centisome position: 56.53

GC content: 43.74

Gene sequence:

>1047_bases
ATGAGGTCGAGTAAGTTAGTTCATGTAGTCTCATGCCACGCAGAAGGTGAAGTGGGTGACGTCATTGTTGGTGGTGTAAA
TCCGCCGCCAGGTGATACTCTGTGGGAGCAAAGAGAGTGGATACATAAAGACAATGAGTTACGAAACTTTGTTCTGAATG
AGCCTAGGGGCGGAGTATTTCGTCACGTTAATTTACTTCTCCCCTCCAAGCACCCTGACGCTAGCTATGCGTGGATTATA
ATGGAACCAGAAGATACTCCCCCTATGTCAGGTTCAAATAGTATTTGTGTCTCAACTGTACTGCTTGATACAGGACTTGT
TCCTATGGTGGAGCCTATTACCGAAATGACCTTAGAAGCGCCAGGCGGATTAGTTAAGGTACGCGCTGAATGTGATAATG
GAAAAGCAAGGCGTATTTTTGTTGAAAACGTTCCGTCTTTTGCCTGTGCATTAGACCAAGCGTTATTTGTTGAAGGTATC
GGTAAATTGACGGTAGATATAGCTTATGGTGGAGACAGCTTTGTCGTTGTTGATCCTAAAGAATTAGGAATAGAACTTAC
CGCTAGCAATGCTGGAAAAATTGCAAAAATTGGTACTAAAATTACAGACGCCGCCAATGCATCATTAAAATTTTATCATC
CAGAAAAAGACTGGAAGCATTTTTCATTCTGTTTGTTTGCAGGAGAACTAGAAAAAACCGAAACAGGGTTTCAGGCTTTA
TCTGCGGTGGTTATTAAACCAGGTAAAGTTGACCGTTGTCCGACAGGTACATCGGTTAGTGCTCGCATGGCTATTCTTCA
TGCTAGAGGGGTAATGAAGGTGGGAGATACACTCTTAGCTGTTTCAGTCATTGGCTCTACCTTTAATGGGAAGATACTGC
GCACTTGCCAGGTGGGTGATTTGGAGGCTATTGTTCCCGAAATATCAGGAAGGGGATGGATTACCGGCACGCATCAGCAC
ATGTTAGATCCCGATGACCCATGGCCACAAGGTTACCGACTCAGTGATACTTGGCCAATGAACGAACAAGATAAAGGTAA
TAACTAA

Upstream 100 bases:

>100_bases
AAAAATTACATTGTATATTGGATCCAATATTGTTAAGTTACGTTAATTATTTAAATTTAAAGTATAAATATAAACGTATG
TTTATTTTTGGGGAGTTATT

Downstream 100 bases:

>100_bases
CATGAAAAATCTTAATTTGTTCAACCCGTTTTTTGATACGTATAGTATCTTTTTACATTCAGCAATCGAGTTTACCTCAT
GAGCCATTTGACTATTAACC

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRSSKLVHVVSCHAEGEVGDVIVGGVNPPPGDTLWEQREWIHKDNELRNFVLNEPRGGVFRHVNLLLPSKHPDASYAWII
MEPEDTPPMSGSNSICVSTVLLDTGLVPMVEPITEMTLEAPGGLVKVRAECDNGKARRIFVENVPSFACALDQALFVEGI
GKLTVDIAYGGDSFVVVDPKELGIELTASNAGKIAKIGTKITDAANASLKFYHPEKDWKHFSFCLFAGELEKTETGFQAL
SAVVIKPGKVDRCPTGTSVSARMAILHARGVMKVGDTLLAVSVIGSTFNGKILRTCQVGDLEAIVPEISGRGWITGTHQH
MLDPDDPWPQGYRLSDTWPMNEQDKGNN

Sequences:

>Translated_348_residues
MRSSKLVHVVSCHAEGEVGDVIVGGVNPPPGDTLWEQREWIHKDNELRNFVLNEPRGGVFRHVNLLLPSKHPDASYAWII
MEPEDTPPMSGSNSICVSTVLLDTGLVPMVEPITEMTLEAPGGLVKVRAECDNGKARRIFVENVPSFACALDQALFVEGI
GKLTVDIAYGGDSFVVVDPKELGIELTASNAGKIAKIGTKITDAANASLKFYHPEKDWKHFSFCLFAGELEKTETGFQAL
SAVVIKPGKVDRCPTGTSVSARMAILHARGVMKVGDTLLAVSVIGSTFNGKILRTCQVGDLEAIVPEISGRGWITGTHQH
MLDPDDPWPQGYRLSDTWPMNEQDKGNN
>Mature_348_residues
MRSSKLVHVVSCHAEGEVGDVIVGGVNPPPGDTLWEQREWIHKDNELRNFVLNEPRGGVFRHVNLLLPSKHPDASYAWII
MEPEDTPPMSGSNSICVSTVLLDTGLVPMVEPITEMTLEAPGGLVKVRAECDNGKARRIFVENVPSFACALDQALFVEGI
GKLTVDIAYGGDSFVVVDPKELGIELTASNAGKIAKIGTKITDAANASLKFYHPEKDWKHFSFCLFAGELEKTETGFQAL
SAVVIKPGKVDRCPTGTSVSARMAILHARGVMKVGDTLLAVSVIGSTFNGKILRTCQVGDLEAIVPEISGRGWITGTHQH
MLDPDDPWPQGYRLSDTWPMNEQDKGNN

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=337, Percent_Identity=28.7833827893175, Blast_Score=157, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37797; Mature: 37797

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSKLVHVVSCHAEGEVGDVIVGGVNPPPGDTLWEQREWIHKDNELRNFVLNEPRGGVF
CCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHEECCCCCCEE
RHVNLLLPSKHPDASYAWIIMEPEDTPPMSGSNSICVSTVLLDTGLVPMVEPITEMTLEA
EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHEECC
PGGLVKVRAECDNGKARRIFVENVPSFACALDQALFVEGIGKLTVDIAYGGDSFVVVDPK
CCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECHH
ELGIELTASNAGKIAKIGTKITDAANASLKFYHPEKDWKHFSFCLFAGELEKTETGFQAL
HHCEEEEECCCCCEEECCCEEECCCCCEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHH
SAVVIKPGKVDRCPTGTSVSARMAILHARGVMKVGDTLLAVSVIGSTFNGKILRTCQVGD
EEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHCCCEEEEEECCCCCCCCEEEEEECCC
LEAIVPEISGRGWITGTHQHMLDPDDPWPQGYRLSDTWPMNEQDKGNN
HHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRSSKLVHVVSCHAEGEVGDVIVGGVNPPPGDTLWEQREWIHKDNELRNFVLNEPRGGVF
CCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHEECCCCCCEE
RHVNLLLPSKHPDASYAWIIMEPEDTPPMSGSNSICVSTVLLDTGLVPMVEPITEMTLEA
EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHEECC
PGGLVKVRAECDNGKARRIFVENVPSFACALDQALFVEGIGKLTVDIAYGGDSFVVVDPK
CCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECHH
ELGIELTASNAGKIAKIGTKITDAANASLKFYHPEKDWKHFSFCLFAGELEKTETGFQAL
HHCEEEEECCCCCEEECCCEEECCCCCEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHH
SAVVIKPGKVDRCPTGTSVSARMAILHARGVMKVGDTLLAVSVIGSTFNGKILRTCQVGD
EEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHCCCEEEEEECCCCCCCCEEEEEECCC
LEAIVPEISGRGWITGTHQHMLDPDDPWPQGYRLSDTWPMNEQDKGNN
HHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]