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The map label for this gene is ugpA [H]

Identifier: 119945761

GI number: 119945761

Start: 2549830

End: 2550711

Strand: Direct

Name: ugpA [H]

Synonym: Ping_2094

Alternate gene names: 119945761

Gene position: 2549830-2550711 (Clockwise)

Preceding gene: 119945760

Following gene: 119945762

Centisome position: 55.92

GC content: 43.2

Gene sequence:

>882_bases
ATGTCATCGCAAGCTGTATTTAAAAATAAATGGTTGCCCATTGCTCTTATCACCCCGCAGCTATTGATTACTGCGGTATT
TTTTCTGTGGCCTGCTGGTCAAGCCATTTTCCAGTCATTTCAACTAGAGGACCCCTTTGGGTTGAGCAGTGAATTTGTTG
GCCTGGAAAATTTTATCCACTTGTACAACGACAGTAATTATCTTGATTCTTTATTCACCACGCTGCAATTTAGTATCAGT
GTCGCCTTTCTTGCCATGATCAGTGCCTTGATATTATCGGCCTTTGCCGAACATATCGTGCGTGGCTCCTTGTTTTACCG
TACCTTTCTTATTTGGCCCTATGCCGTTGCCCCCCTTGTGGCAGGATCGCTCTGGCTGTTTTTATTTGATCCCACCATCG
GCGTTATTGCAGAACTATTACAATGGTTCGGGATTAACTGGAATCCGACACTCAACGATGCACACGCTATGTGGATGGTG
ATTATTACATCAACCTGGAAACAAATTAGTTATAACTTTTTATTTTTCCTTGCCGCATTACAATCTGTCCCCAAATCGCT
GCATGAAGCGGCGGCCATTGATGGCAGTGGCCCGGTAAAACGCTTTATCACCATCAGCTTTCCATTGATCTCACCCACCA
GCTTTTTCTTATTAGTGATTAATTTCGTCTATGCGTTTTTCGATACCTTTGGGATTATTCACGCAATGACCCAAGGAGGA
CCCGGCAGAAGTACCTCGACGCTAGTATACAAAGTTTATAACGATGGGTTTATTGGGCTGAATCTGGGCTCCTCAGCAGC
TCAATCGGTCATTTTAATGATAATGGTGGCGCTCTTAACCGTATTCCAATTTAAATACATAGAAAAAAAGGTAGCCTACT
AA

Upstream 100 bases:

>100_bases
GTCTTAATATTATATCGCCACTTTTGTTAAAAAGTGGTGATATTTTACTTCCTGACTATAAGTATCACTATCAACATGAC
TATAAAACTGTGGAACATCT

Downstream 100 bases:

>100_bases
TGGTAGAACGAAGACCCCTCTTTACGCTTTTTTGCCATATTATTTTAATCCTTGGCATTCTTTCAATTGCTTTCCCCGTG
TGGGTAGCATTGGTTGCTAC

Product: sn-glycerol-3-phosphate transport system, binding protein inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSSQAVFKNKWLPIALITPQLLITAVFFLWPAGQAIFQSFQLEDPFGLSSEFVGLENFIHLYNDSNYLDSLFTTLQFSIS
VAFLAMISALILSAFAEHIVRGSLFYRTFLIWPYAVAPLVAGSLWLFLFDPTIGVIAELLQWFGINWNPTLNDAHAMWMV
IITSTWKQISYNFLFFLAALQSVPKSLHEAAAIDGSGPVKRFITISFPLISPTSFFLLVINFVYAFFDTFGIIHAMTQGG
PGRSTSTLVYKVYNDGFIGLNLGSSAAQSVILMIMVALLTVFQFKYIEKKVAY

Sequences:

>Translated_293_residues
MSSQAVFKNKWLPIALITPQLLITAVFFLWPAGQAIFQSFQLEDPFGLSSEFVGLENFIHLYNDSNYLDSLFTTLQFSIS
VAFLAMISALILSAFAEHIVRGSLFYRTFLIWPYAVAPLVAGSLWLFLFDPTIGVIAELLQWFGINWNPTLNDAHAMWMV
IITSTWKQISYNFLFFLAALQSVPKSLHEAAAIDGSGPVKRFITISFPLISPTSFFLLVINFVYAFFDTFGIIHAMTQGG
PGRSTSTLVYKVYNDGFIGLNLGSSAAQSVILMIMVALLTVFQFKYIEKKVAY
>Mature_292_residues
SSQAVFKNKWLPIALITPQLLITAVFFLWPAGQAIFQSFQLEDPFGLSSEFVGLENFIHLYNDSNYLDSLFTTLQFSISV
AFLAMISALILSAFAEHIVRGSLFYRTFLIWPYAVAPLVAGSLWLFLFDPTIGVIAELLQWFGINWNPTLNDAHAMWMVI
ITSTWKQISYNFLFFLAALQSVPKSLHEAAAIDGSGPVKRFITISFPLISPTSFFLLVINFVYAFFDTFGIIHAMTQGGP
GRSTSTLVYKVYNDGFIGLNLGSSAAQSVILMIMVALLTVFQFKYIEKKVAY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=58.2191780821918, Blast_Score=345, Evalue=1e-96,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=28.1853281853282, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=25.7692307692308, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32804; Mature: 32673

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQAVFKNKWLPIALITPQLLITAVFFLWPAGQAIFQSFQLEDPFGLSSEFVGLENFIH
CCCCCCHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
LYNDSNYLDSLFTTLQFSISVAFLAMISALILSAFAEHIVRGSLFYRTFLIWPYAVAPLV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSLWLFLFDPTIGVIAELLQWFGINWNPTLNDAHAMWMVIITSTWKQISYNFLFFLAAL
HHHHHHHEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVPKSLHEAAAIDGSGPVKRFITISFPLISPTSFFLLVINFVYAFFDTFGIIHAMTQGG
HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGRSTSTLVYKVYNDGFIGLNLGSSAAQSVILMIMVALLTVFQFKYIEKKVAY
CCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSQAVFKNKWLPIALITPQLLITAVFFLWPAGQAIFQSFQLEDPFGLSSEFVGLENFIH
CCCCCHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
LYNDSNYLDSLFTTLQFSISVAFLAMISALILSAFAEHIVRGSLFYRTFLIWPYAVAPLV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSLWLFLFDPTIGVIAELLQWFGINWNPTLNDAHAMWMVIITSTWKQISYNFLFFLAAL
HHHHHHHEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVPKSLHEAAAIDGSGPVKRFITISFPLISPTSFFLLVINFVYAFFDTFGIIHAMTQGG
HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGRSTSTLVYKVYNDGFIGLNLGSSAAQSVILMIMVALLTVFQFKYIEKKVAY
CCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]