Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is yeeN [C]

Identifier: 119945734

GI number: 119945734

Start: 2513142

End: 2513867

Strand: Direct

Name: yeeN [C]

Synonym: Ping_2063

Alternate gene names: 119945734

Gene position: 2513142-2513867 (Clockwise)

Preceding gene: 119945733

Following gene: 119945739

Centisome position: 55.12

GC content: 40.5

Gene sequence:

>726_bases
ATGGGAAGAGCATATCAAAACCGCAAATTGTCTATGGCCAAAACAGCGGGCGCTAAAACTAAAGTTTATTCTAAGTACGG
TAAAGAGATTTACGTTGCGGCTAAAAATGGTGGGTTTGATCCGGATGGAAACCTCTCATTACGTCATTTAATCGATGGTG
CCAAAAAAGACCAAGTACCCACACACGTCATCGAACGTGCGATTGAAAAAGCGAAAGGCGGCGGTGGTGAAGATTATGAA
CGCGCCAGCTATGAAGGTTATGGTCCCGGTGGATGTTCTGTAATTGTGGATTGTTTAACCGATAACAATAAACGTACTTG
GACTGATGTACGCAACTGTTTTATGAAAACCGGTGGTAACATTGGTTCACCCGGTACAGTTGCGCATATGTTTGAACATC
AAGCTGTTTTTGTATTTAAAGGCGAAGATGATGAAGCGGTTTTAGAAGAGCTGATGATGGCTGATGTGGACGTGATCGAT
GTTGAAGGTGAAGACGGTAAGATCACTGTTTTTTGTCCCCACACTGAATTCTATAAAGCAAAAACAGCATTAAATGAGAT
TTACCCAAATCTTGAGCTGGATATAGAAGAAATCACTTTTGTACCGCAAATAGACCATGATATTGCACCTGAGCATGTTG
ATAAATTTGAAAAATTTATGGCTATGTTAGAAGACTGTGATGATGTGCAAGAGGTTTACCATAACGCAGTATTACCTGAT
GAATAA

Upstream 100 bases:

>100_bases
TAAAGTAAACTTTTTTGATGTGGGACTTTCATAATGGTCTCCTTAAGAGGTAAAATTCTAACTATTATTTTTAACAATCC
AATATAAAGAGTCTAATCAG

Downstream 100 bases:

>100_bases
CGCCGAATTAAAATTATCTAAATAATGTTGCCTGATTAATTACAATTTCAATGACACTTGTTTAACAAACTTGGTGGCAT
GCAAAACCATTTGAATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MGRAYQNRKLSMAKTAGAKTKVYSKYGKEIYVAAKNGGFDPDGNLSLRHLIDGAKKDQVPTHVIERAIEKAKGGGGEDYE
RASYEGYGPGGCSVIVDCLTDNNKRTWTDVRNCFMKTGGNIGSPGTVAHMFEHQAVFVFKGEDDEAVLEELMMADVDVID
VEGEDGKITVFCPHTEFYKAKTALNEIYPNLELDIEEITFVPQIDHDIAPEHVDKFEKFMAMLEDCDDVQEVYHNAVLPD
E

Sequences:

>Translated_241_residues
MGRAYQNRKLSMAKTAGAKTKVYSKYGKEIYVAAKNGGFDPDGNLSLRHLIDGAKKDQVPTHVIERAIEKAKGGGGEDYE
RASYEGYGPGGCSVIVDCLTDNNKRTWTDVRNCFMKTGGNIGSPGTVAHMFEHQAVFVFKGEDDEAVLEELMMADVDVID
VEGEDGKITVFCPHTEFYKAKTALNEIYPNLELDIEEITFVPQIDHDIAPEHVDKFEKFMAMLEDCDDVQEVYHNAVLPD
E
>Mature_240_residues
GRAYQNRKLSMAKTAGAKTKVYSKYGKEIYVAAKNGGFDPDGNLSLRHLIDGAKKDQVPTHVIERAIEKAKGGGGEDYER
ASYEGYGPGGCSVIVDCLTDNNKRTWTDVRNCFMKTGGNIGSPGTVAHMFEHQAVFVFKGEDDEAVLEELMMADVDVIDV
EGEDGKITVFCPHTEFYKAKTALNEIYPNLELDIEEITFVPQIDHDIAPEHVDKFEKFMAMLEDCDDVQEVYHNAVLPDE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=228, Percent_Identity=25.4385964912281, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=44.2553191489362, Blast_Score=201, Evalue=4e-53,
Organism=Escherichia coli, GI1788171, Length=240, Percent_Identity=37.5, Blast_Score=165, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321458, Length=252, Percent_Identity=30.1587301587302, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2063_PSYIN (A1SWF0)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_943414.1
- ProteinModelPortal:   A1SWF0
- SMR:   A1SWF0
- STRING:   A1SWF0
- GeneID:   4624666
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_2063
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VSHMFDH
- PhylomeDB:   A1SWF0
- ProtClustDB:   PRK12378
- BioCyc:   PING357804:PING_2063-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26809; Mature: 26678

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAYQNRKLSMAKTAGAKTKVYSKYGKEIYVAAKNGGFDPDGNLSLRHLIDGAKKDQVP
CCCCCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCH
THVIERAIEKAKGGGGEDYERASYEGYGPGGCSVIVDCLTDNNKRTWTDVRNCFMKTGGN
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCC
IGSPGTVAHMFEHQAVFVFKGEDDEAVLEELMMADVDVIDVEGEDGKITVFCPHTEFYKA
CCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCHHHHHH
KTALNEIYPNLELDIEEITFVPQIDHDIAPEHVDKFEKFMAMLEDCDDVQEVYHNAVLPD
HHHHHHHCCCCEECHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
E
C
>Mature Secondary Structure 
GRAYQNRKLSMAKTAGAKTKVYSKYGKEIYVAAKNGGFDPDGNLSLRHLIDGAKKDQVP
CCCCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCH
THVIERAIEKAKGGGGEDYERASYEGYGPGGCSVIVDCLTDNNKRTWTDVRNCFMKTGGN
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCC
IGSPGTVAHMFEHQAVFVFKGEDDEAVLEELMMADVDVIDVEGEDGKITVFCPHTEFYKA
CCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCHHHHHH
KTALNEIYPNLELDIEEITFVPQIDHDIAPEHVDKFEKFMAMLEDCDDVQEVYHNAVLPD
HHHHHHHCCCCEECHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA