Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119945720

Identifier: 119945720

GI number: 119945720

Start: 2490686

End: 2491156

Strand: Reverse

Name: 119945720

Synonym: Ping_2045

Alternate gene names: NA

Gene position: 2491156-2490686 (Counterclockwise)

Preceding gene: 119945721

Following gene: 119945719

Centisome position: 54.64

GC content: 37.58

Gene sequence:

>471_bases
ATGACTGATATCAATATAGGAATAAATACTGAAGATAGAAATAAAATTGCTGAAGGACTAAAATGCCTTTTGGCCGATTC
TTATACTTTGTATTTACAGACACACAACTTTCATTGGAATGTAAGCGGTCCACAATTCAGAGAGTTACACTTAATGTTTG
AAGAGCAATACCTTGAATTAGCGGTTGCCGTAGATGATATAGCAGAGCGTATTCGTACGTTAGATGTCGCAGCGCCAGGT
ACATATAAAGAGTTTTCCAGACTCACTTCTATCGAAGAAGTTGATGGTGTTCCAAGTTCAGAAGTAATGCTTGATTTATT
GACTAAGGGGCATGAGCAAGTTGTTAACACCTCTAGAAAAGTATTAAAGCTGGCACAATCAGGAGATGATGAGTCAACAA
TAGCATTAGTCTCAGACCGTATGCGAGTTCATGAAAAAACATCGTGGATGTTACGTGCTACTAGAAAATAA

Upstream 100 bases:

>100_bases
GTCTGTACCTCAAAGTTCAATCTGCTGTATAATACGTCACTGTGAGTTATAAACTGTTATGATCTAAAGCGTTAAATTCT
CATTCATAGAAGGAAATAAA

Downstream 100 bases:

>100_bases
CTGAACCCGAACATTAAGCATAAGGGCAGATCGTAAGAGCAACGAAACTACGATCTTATCCTTATTTGTTATGGTCTTAA
TATTAGCATTTTCCGCTAAT

Product: Ferritin, Dps family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTDINIGINTEDRNKIAEGLKCLLADSYTLYLQTHNFHWNVSGPQFRELHLMFEEQYLELAVAVDDIAERIRTLDVAAPG
TYKEFSRLTSIEEVDGVPSSEVMLDLLTKGHEQVVNTSRKVLKLAQSGDDESTIALVSDRMRVHEKTSWMLRATRK

Sequences:

>Translated_156_residues
MTDINIGINTEDRNKIAEGLKCLLADSYTLYLQTHNFHWNVSGPQFRELHLMFEEQYLELAVAVDDIAERIRTLDVAAPG
TYKEFSRLTSIEEVDGVPSSEVMLDLLTKGHEQVVNTSRKVLKLAQSGDDESTIALVSDRMRVHEKTSWMLRATRK
>Mature_155_residues
TDINIGINTEDRNKIAEGLKCLLADSYTLYLQTHNFHWNVSGPQFRELHLMFEEQYLELAVAVDDIAERIRTLDVAAPGT
YKEFSRLTSIEEVDGVPSSEVMLDLLTKGHEQVVNTSRKVLKLAQSGDDESTIALVSDRMRVHEKTSWMLRATRK

Specific function: Unknown

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 17767; Mature: 17636

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDINIGINTEDRNKIAEGLKCLLADSYTLYLQTHNFHWNVSGPQFRELHLMFEEQYLEL
CCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHH
AVAVDDIAERIRTLDVAAPGTYKEFSRLTSIEEVDGVPSSEVMLDLLTKGHEQVVNTSRK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
VLKLAQSGDDESTIALVSDRMRVHEKTSWMLRATRK
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
TDINIGINTEDRNKIAEGLKCLLADSYTLYLQTHNFHWNVSGPQFRELHLMFEEQYLEL
CEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHH
AVAVDDIAERIRTLDVAAPGTYKEFSRLTSIEEVDGVPSSEVMLDLLTKGHEQVVNTSRK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
VLKLAQSGDDESTIALVSDRMRVHEKTSWMLRATRK
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]