| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is galM [H]
Identifier: 119945701
GI number: 119945701
Start: 2456322
End: 2457395
Strand: Direct
Name: galM [H]
Synonym: Ping_2018
Alternate gene names: 119945701
Gene position: 2456322-2457395 (Clockwise)
Preceding gene: 119945700
Following gene: 119945702
Centisome position: 53.87
GC content: 45.62
Gene sequence:
>1074_bases ATGACCCTAAGTCGAGCAGAACAGTTACAGAAAAGCATGAGTATTGATCCCGCTTTTGATGGTCAACCCGCTAAAATTTT TGTTTTAAAAAACAGGCTGGGTATGTGTATCACACTGATGGATATTGGTGCGACTTGGTTAAGCTGTGAAATTCCTGTTG GCGATCAAATGCGCGACGTCATTCTTGGCGTCACGACTATGAATGATCATTTACGTCAGAAAGCTTATCTTGGCGCAACG ATTGGCCGCTTTGCAAACCGACTTAGCGGCGGACAATTTAAGATTGCCGGGCAACATTATCAAGTTGATAAAAATCAAGG GAATAATACCCTGCACGGTGGCGTGACAGGTTTTGATAAGTGCCGCTGGCACGCACAGCAGCTCAATAATCAGTGCGTTA CTTTTACACTCTTATCCAAAGATGGCGACCAGGGTTTCCCAGGCAATTTAGACGTTAAAGTCACCTACCACTTAAGCGAT GACAATGAACTGTCCATTGATTATTGGGCAGTGACGGATAAAGCGTGTCCCGTGAGCCTGACCAATCATGCTTATTTTAA TTTGATGGGCGAGTCCGGGCAATGCTGTTTACAGCATCAGTTGTTTATTGCCGCCGAACACTATCTGCCGGTGAATAATA CGGGCATTCCTATCGGGCATATAAAACCTGTTGCGGGCAGTCGTTTTGATTTTAGCGCGCTGAAAGAAATCAGTCAGGAC TTCTTAAGTTGCCAGGATCAGAAGATAGTCGGCGGTTATGATCATTCATTTTTAATCAACAAGGCGCATCAGGATGGCAG CAAAGTGGCGGCTAAATGTGTTTCACCGGATAAAAAAGTGACCCTTGAAATAAAAACCACGCAACCTGCTCTGCAGCTTT ATACGGGAAATTATTTAGGCGGGACCCCGAACCGTTCTGGGGGGACCTATAAAAACCGGTCAGCATTGGCGCTGGAAACG CAATTTTTACCCGACGCACCCAATCACCCTGAATGGGATCAGCCCAGCTCAATATTATTGCCTGGTGAGGTATACGCCCA TCAAACATCTTATCGCTTTACTGTTGCCGATTAA
Upstream 100 bases:
>100_bases GTTTGCAATGCAAGTGTGGGCGCGGGCATTGTCTTAGAAAAATGACAAATGAAGAGTGAAAAGTAATTTAACAAAAAAAG TAATATGACAGAGAAACAAT
Downstream 100 bases:
>100_bases CGAGTATCTCGTTGAGGTATAAAGAACATATTGAATTAATGCCGTGCGGTTAAGCCATTTCAGGCTTATGTCTCAACGGA TATCTTAATAGTATATAAAG
Product: galactose mutarotase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTLSRAEQLQKSMSIDPAFDGQPAKIFVLKNRLGMCITLMDIGATWLSCEIPVGDQMRDVILGVTTMNDHLRQKAYLGAT IGRFANRLSGGQFKIAGQHYQVDKNQGNNTLHGGVTGFDKCRWHAQQLNNQCVTFTLLSKDGDQGFPGNLDVKVTYHLSD DNELSIDYWAVTDKACPVSLTNHAYFNLMGESGQCCLQHQLFIAAEHYLPVNNTGIPIGHIKPVAGSRFDFSALKEISQD FLSCQDQKIVGGYDHSFLINKAHQDGSKVAAKCVSPDKKVTLEIKTTQPALQLYTGNYLGGTPNRSGGTYKNRSALALET QFLPDAPNHPEWDQPSSILLPGEVYAHQTSYRFTVAD
Sequences:
>Translated_357_residues MTLSRAEQLQKSMSIDPAFDGQPAKIFVLKNRLGMCITLMDIGATWLSCEIPVGDQMRDVILGVTTMNDHLRQKAYLGAT IGRFANRLSGGQFKIAGQHYQVDKNQGNNTLHGGVTGFDKCRWHAQQLNNQCVTFTLLSKDGDQGFPGNLDVKVTYHLSD DNELSIDYWAVTDKACPVSLTNHAYFNLMGESGQCCLQHQLFIAAEHYLPVNNTGIPIGHIKPVAGSRFDFSALKEISQD FLSCQDQKIVGGYDHSFLINKAHQDGSKVAAKCVSPDKKVTLEIKTTQPALQLYTGNYLGGTPNRSGGTYKNRSALALET QFLPDAPNHPEWDQPSSILLPGEVYAHQTSYRFTVAD >Mature_356_residues TLSRAEQLQKSMSIDPAFDGQPAKIFVLKNRLGMCITLMDIGATWLSCEIPVGDQMRDVILGVTTMNDHLRQKAYLGATI GRFANRLSGGQFKIAGQHYQVDKNQGNNTLHGGVTGFDKCRWHAQQLNNQCVTFTLLSKDGDQGFPGNLDVKVTYHLSDD NELSIDYWAVTDKACPVSLTNHAYFNLMGESGQCCLQHQLFIAAEHYLPVNNTGIPIGHIKPVAGSRFDFSALKEISQDF LSCQDQKIVGGYDHSFLINKAHQDGSKVAAKCVSPDKKVTLEIKTTQPALQLYTGNYLGGTPNRSGGTYKNRSALALETQ FLPDAPNHPEWDQPSSILLPGEVYAHQTSYRFTVAD
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=341, Percent_Identity=39.0029325513196, Blast_Score=225, Evalue=5e-59, Organism=Escherichia coli, GI1786971, Length=337, Percent_Identity=50.4451038575668, Blast_Score=339, Evalue=2e-94, Organism=Caenorhabditis elegans, GI17557428, Length=328, Percent_Identity=30.1829268292683, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI115533334, Length=328, Percent_Identity=30.1829268292683, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6319493, Length=329, Percent_Identity=28.2674772036474, Blast_Score=119, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6322004, Length=341, Percent_Identity=30.791788856305, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324399, Length=340, Percent_Identity=26.7647058823529, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24659048, Length=344, Percent_Identity=35.7558139534884, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24668278, Length=366, Percent_Identity=34.1530054644809, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583720, Length=360, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24668282, Length=342, Percent_Identity=32.1637426900585, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24641876, Length=351, Percent_Identity=29.3447293447293, Blast_Score=148, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39373; Mature: 39242
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRAEQLQKSMSIDPAFDGQPAKIFVLKNRLGMCITLMDIGATWLSCEIPVGDQMRDV CCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCEE ILGVTTMNDHLRQKAYLGATIGRFANRLSGGQFKIAGQHYQVDKNQGNNTLHGGVTGFDK EEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCEEECCCCCHHH CRWHAQQLNNQCVTFTLLSKDGDQGFPGNLDVKVTYHLSDDNELSIDYWAVTDKACPVSL HHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEE TNHAYFNLMGESGQCCLQHQLFIAAEHYLPVNNTGIPIGHIKPVAGSRFDFSALKEISQD CCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FLSCQDQKIVGGYDHSFLINKAHQDGSKVAAKCVSPDKKVTLEIKTTQPALQLYTGNYLG HHCCCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCC GTPNRSGGTYKNRSALALETQFLPDAPNHPEWDQPSSILLPGEVYAHQTSYRFTVAD CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCHHEEECCEEEEEECC >Mature Secondary Structure TLSRAEQLQKSMSIDPAFDGQPAKIFVLKNRLGMCITLMDIGATWLSCEIPVGDQMRDV CCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCEE ILGVTTMNDHLRQKAYLGATIGRFANRLSGGQFKIAGQHYQVDKNQGNNTLHGGVTGFDK EEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCEEECCCCCHHH CRWHAQQLNNQCVTFTLLSKDGDQGFPGNLDVKVTYHLSDDNELSIDYWAVTDKACPVSL HHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEE TNHAYFNLMGESGQCCLQHQLFIAAEHYLPVNNTGIPIGHIKPVAGSRFDFSALKEISQD CCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FLSCQDQKIVGGYDHSFLINKAHQDGSKVAAKCVSPDKKVTLEIKTTQPALQLYTGNYLG HHCCCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCC GTPNRSGGTYKNRSALALETQFLPDAPNHPEWDQPSSILLPGEVYAHQTSYRFTVAD CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCHHEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]