Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is yddG [H]

Identifier: 119945639

GI number: 119945639

Start: 2372870

End: 2373796

Strand: Direct

Name: yddG [H]

Synonym: Ping_1951

Alternate gene names: 119945639

Gene position: 2372870-2373796 (Clockwise)

Preceding gene: 119945637

Following gene: 119945640

Centisome position: 52.04

GC content: 44.01

Gene sequence:

>927_bases
TTGAATAACATACATAAATGCACCATTGCAGGCTGCTTGGCTATTCTAATATGGAGTACAACGGTTGGGTTGGTGCGCAA
TGTGGCGGAACAATTAGGTCCTATTGGTGGTGCTGCAATGATTTATTCTGTGAGTGCTGTGTTTCTTTTGGTATTTCTTG
GTGCGCCCCGCTTTAAAGTCTTCTCGTTAAAATACCTTCTGATCGGTGGAACACTGTTTGTCAGCTATGAAATTTGCTTA
TCGCTTGCCTTGGGAATGGCTAATAACCGCATTCAAGCAGTCGAAATGGGCGTCATTAATTATTTGTGGCCATCTTTAGT
GGTATTACTCGCGGTGTTTACCAGTAAGAAGCCGGTTGATAAAAGACTTTATCCGGCGATAGCCCTGTCGTTTTTTGGTG
TAGCTTGGACGGTGAGTGGTGATGGCGGGCTTTCGATTAGTCAATTGGCCGGTAATATAGCAACCAACCCTTTAAGTTAC
TCAATGGCGCTCGGTGGGGCTTTTATTTGGGCATTTTACTGCAATATCACTAAGCGACTGGCGAACGGAAGAAATGCTAT
TACCTGGTTCTTTATCGCCACCGCGATAGCTTTGTGGATCACCTATTTTATGAGTAATGAACCTGCCATCGCTTTTACAT
CAGGTGCGGCAGTTGATTTATTGATAACGGGCGTTGCGATGGGCAGCGGATATGCATTATGGAACATAGGTATTATTGGC
GGCAATATGATGCTGCTGGCAACCCTGTCATATTTCACGCCTTTATTATCTACTTTCTTCTCCGCATTGATTTTGAATAT
TGAACTCACTGCAACGTTTTGGCAAGGCGTGGTAATGGTGACTATTGCCTCCTTACTTTGTTGGTGGTTTACCCGAGAAA
AACCTTCTCCTGCAGTAGATGTTACCCGACCTATCAAGGTTGAATAA

Upstream 100 bases:

>100_bases
ATTCATAATACATTCACTTATTTTTGCTTCATATAATAAGCCGTATTTGTTAGCCTTCATTATCGTGCAAATCTGATAGA
CAAACACAAAAGGAATTATC

Downstream 100 bases:

>100_bases
GTTGCCATATGTTGCCATATGTTGAACGTTGTCAAATTAACAAGCTTCTCATTCAGAATAGCCCGGTGTCAGACTCATTT
TTGATAACGATTAGAAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL
SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY
SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG
GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE

Sequences:

>Translated_308_residues
MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL
SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY
SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG
GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE
>Mature_308_residues
MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL
SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY
SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG
GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI145693132, Length=289, Percent_Identity=45.6747404844291, Blast_Score=267, Evalue=7e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33304; Mature: 33304

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEH
FSLKYLLIGGTLFVSYEICLSLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVD
EEEEHHEECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSYSMALGGAFIWAFYCNITKRL
HHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEEEEEC
GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVD
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VTRPIKVE
CCCCCCCC
>Mature Secondary Structure
MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEH
FSLKYLLIGGTLFVSYEICLSLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVD
EEEEHHEECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSYSMALGGAFIWAFYCNITKRL
HHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEEEEEC
GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVD
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VTRPIKVE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1834669; 7567469 [H]