| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ybbJ [C]
Identifier: 119945574
GI number: 119945574
Start: 2283755
End: 2284237
Strand: Direct
Name: ybbJ [C]
Synonym: Ping_1879
Alternate gene names: 119945574
Gene position: 2283755-2284237 (Clockwise)
Preceding gene: 119945573
Following gene: 119945575
Centisome position: 50.09
GC content: 37.89
Gene sequence:
>483_bases ATGGAATATTTTTTAGCGCATTTAGCACAAGTTTTTATCGTATCGGGGCTTATTTTATTAGCGATTGAAGTTCTGGTCTT GGGTTTTTCGACTTTTGTTTTCTTTTTTATTGGGGTCGGCGCCATTGCGACTGGTGCTCTAATAGCGCTAGGGATTATTC CAGCAACCTTTCTTAATTCATTATTGGTAACGGCTATCATATCCACTGTCGCGGCATTAATCAGTTGGAAGCCACTGAAA AAAATGCAAAATAAAGTTGGTTCAAAACATGTCAATAATGACATGATTGGACATCAATTTGTATTAACTGAAGATCTGCG GATCGGAAAAACGATTACTCATCGTTATTCCGGCATCAATTGGCAGGTTAAAGCAAAAGAGCCACTCTCTGCTGGAACCA ACGTCAAAATAATAGAAATAGAAGTCGGTTTATTGACTGTTGAAGGAGTTGACTCACTAAGTACTCACAAGAAAGTTTTA TGA
Upstream 100 bases:
>100_bases AAGAATCATCAGTGGTATTGCTACCCGATAGTGGTAATGATGCTGCCTCTATTGTCGCACAGGCGATGACCATCATTAAT ACGTTAAATAAAGGCTAATT
Downstream 100 bases:
>100_bases TCTTAAAGAGTACTTGGTAATAAAAACATTAACGGACTGAGTCTAATAGTACAGTCCGTTGATATTTTTTTTCTAAGCCG AATACATATAAACCTCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MEYFLAHLAQVFIVSGLILLAIEVLVLGFSTFVFFFIGVGAIATGALIALGIIPATFLNSLLVTAIISTVAALISWKPLK KMQNKVGSKHVNNDMIGHQFVLTEDLRIGKTITHRYSGINWQVKAKEPLSAGTNVKIIEIEVGLLTVEGVDSLSTHKKVL
Sequences:
>Translated_160_residues MEYFLAHLAQVFIVSGLILLAIEVLVLGFSTFVFFFIGVGAIATGALIALGIIPATFLNSLLVTAIISTVAALISWKPLK KMQNKVGSKHVNNDMIGHQFVLTEDLRIGKTITHRYSGINWQVKAKEPLSAGTNVKIIEIEVGLLTVEGVDSLSTHKKVL >Mature_160_residues MEYFLAHLAQVFIVSGLILLAIEVLVLGFSTFVFFFIGVGAIATGALIALGIIPATFLNSLLVTAIISTVAALISWKPLK KMQNKVGSKHVNNDMIGHQFVLTEDLRIGKTITHRYSGINWQVKAKEPLSAGTNVKIIEIEVGLLTVEGVDSLSTHKKVL
Specific function: Unknown
COG id: COG1585
COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17328; Mature: 17328
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYFLAHLAQVFIVSGLILLAIEVLVLGFSTFVFFFIGVGAIATGALIALGIIPATFLNS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVTAIISTVAALISWKPLKKMQNKVGSKHVNNDMIGHQFVLTEDLRIGKTITHRYSGIN HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC WQVKAKEPLSAGTNVKIIEIEVGLLTVEGVDSLSTHKKVL EEEECCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCC >Mature Secondary Structure MEYFLAHLAQVFIVSGLILLAIEVLVLGFSTFVFFFIGVGAIATGALIALGIIPATFLNS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVTAIISTVAALISWKPLKKMQNKVGSKHVNNDMIGHQFVLTEDLRIGKTITHRYSGIN HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC WQVKAKEPLSAGTNVKIIEIEVGLLTVEGVDSLSTHKKVL EEEECCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA