| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945521
Identifier: 119945521
GI number: 119945521
Start: 2213678
End: 2214586
Strand: Direct
Name: 119945521
Synonym: Ping_1825
Alternate gene names: NA
Gene position: 2213678-2214586 (Clockwise)
Preceding gene: 119945520
Following gene: 119945522
Centisome position: 48.55
GC content: 44.22
Gene sequence:
>909_bases ATGAATAACACTGCCAAACCAATTAAAACGCGAGAACTCCATAATCATCATTTTGATTCTACAATTTGGAATGAGCTTAA TTTTAGAGACGATGATATTGTTATTTCAACCTACGCTAAATCAGGAACAACCTGGGTACAACAGATTATCTCTCAGCTTT TGTTCAACGGCGAAGAAGGACTGGAAGTGGCAGAAATGTCCCCATGGCTTGATCTGCGAGTGCCGCCTAAAGAGGTAAAA CTGCCGATGGTCGAGGCACAGACTCATCGACGGTTTTTAAAAACGCATCTACCTGTTGATGCATTGACCTTTTCTGAAAA GGCTAAGTACATTTATATCGGCCGCGACGGGCGCGATGTTTTATGGAGCATGTTCAACCATCACTCGACTGCTAATCAGG CCTGGTATGAAGCTTTAAATGACACTCCCGGTAGAGTCGGACCCGCAATTGAAAAGCCATCGGGTTCAATAACTGAGTAT TACCATCATTGGCTCGATCAAGATGGGCACCCTTGGTGGTCATTTTGGGAAAATATCCGATCTTGGTGGGCAATCAGAAA TCTACCGAATGTCTATTTTTTGCATTTCGAAAATCTTAAAAACGATATGCCCGGAGAGATTCGCCGCTTAGCAGAATTCC TTGGAACCCCGATTGATGAAGACAAATGGGAGTCTATACTGCGCCATTGCAGTTTTGAATATATGAAAAAAAATGCCGCA AAAAGCGTCCCCCTTGGTGGTGCTTTTTGGAATGGCGGTGCACAAACCTTTATTCATAAAGGGACGAATGGTCGTTGGCG CGATGTCCTAAGCGCAGAGGATTCTTACAAATACGAGCATCGAGCAGCACAAGAACTCGATTCTAAATGTGCTTCTTGGC TCGCTACGGGTGAAATTTCACAGGGCTGA
Upstream 100 bases:
>100_bases AATATAAATTAATGTTGCTTGTCTTTTACACTTCGGGGCTGGAAATGAAAAATTATACCGCCTCGTCATAGATCTTTAAC TATAAAAGTGAGAAGTTTTT
Downstream 100 bases:
>100_bases ATCAATTGCATCGATGGATAAGACCAAAAGAGCTGAAAAAATGATCACTTGCGGGTTAAAATCATCCCTAACTGCGTTGT GATTTTTATTCAGAAGATAC
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNNTAKPIKTRELHNHHFDSTIWNELNFRDDDIVISTYAKSGTTWVQQIISQLLFNGEEGLEVAEMSPWLDLRVPPKEVK LPMVEAQTHRRFLKTHLPVDALTFSEKAKYIYIGRDGRDVLWSMFNHHSTANQAWYEALNDTPGRVGPAIEKPSGSITEY YHHWLDQDGHPWWSFWENIRSWWAIRNLPNVYFLHFENLKNDMPGEIRRLAEFLGTPIDEDKWESILRHCSFEYMKKNAA KSVPLGGAFWNGGAQTFIHKGTNGRWRDVLSAEDSYKYEHRAAQELDSKCASWLATGEISQG
Sequences:
>Translated_302_residues MNNTAKPIKTRELHNHHFDSTIWNELNFRDDDIVISTYAKSGTTWVQQIISQLLFNGEEGLEVAEMSPWLDLRVPPKEVK LPMVEAQTHRRFLKTHLPVDALTFSEKAKYIYIGRDGRDVLWSMFNHHSTANQAWYEALNDTPGRVGPAIEKPSGSITEY YHHWLDQDGHPWWSFWENIRSWWAIRNLPNVYFLHFENLKNDMPGEIRRLAEFLGTPIDEDKWESILRHCSFEYMKKNAA KSVPLGGAFWNGGAQTFIHKGTNGRWRDVLSAEDSYKYEHRAAQELDSKCASWLATGEISQG >Mature_302_residues MNNTAKPIKTRELHNHHFDSTIWNELNFRDDDIVISTYAKSGTTWVQQIISQLLFNGEEGLEVAEMSPWLDLRVPPKEVK LPMVEAQTHRRFLKTHLPVDALTFSEKAKYIYIGRDGRDVLWSMFNHHSTANQAWYEALNDTPGRVGPAIEKPSGSITEY YHHWLDQDGHPWWSFWENIRSWWAIRNLPNVYFLHFENLKNDMPGEIRRLAEFLGTPIDEDKWESILRHCSFEYMKKNAA KSVPLGGAFWNGGAQTFIHKGTNGRWRDVLSAEDSYKYEHRAAQELDSKCASWLATGEISQG
Specific function: Involved in the synthesis of cell wall sulfolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfotransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI31563388, Length=271, Percent_Identity=28.0442804428044, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI31563386, Length=271, Percent_Identity=28.0442804428044, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4507305, Length=259, Percent_Identity=25.8687258687259, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI28830308, Length=276, Percent_Identity=26.8115942028986, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI29540539, Length=279, Percent_Identity=27.5985663082437, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI29540537, Length=279, Percent_Identity=27.5985663082437, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI29540535, Length=279, Percent_Identity=27.5985663082437, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI29540531, Length=279, Percent_Identity=27.5985663082437, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI29550893, Length=277, Percent_Identity=27.0758122743682, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI4507303, Length=277, Percent_Identity=27.0758122743682, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI29550928, Length=278, Percent_Identity=28.0575539568345, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI4885617, Length=266, Percent_Identity=29.6992481203008, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI56847626, Length=262, Percent_Identity=25.1908396946565, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI29540545, Length=280, Percent_Identity=27.1428571428571, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI29550921, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI10835035, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI62868225, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI62868223, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI29029530, Length=271, Percent_Identity=24.3542435424354, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI7657633, Length=268, Percent_Identity=24.6268656716418, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI74024919, Length=271, Percent_Identity=25.4612546125461, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17566452, Length=259, Percent_Identity=25.0965250965251, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI221468277, Length=267, Percent_Identity=26.9662921348315, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI221468280, Length=286, Percent_Identity=26.5734265734266, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI22026942, Length=286, Percent_Identity=26.5734265734266, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24653521, Length=277, Percent_Identity=26.7148014440433, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24645281, Length=275, Percent_Identity=21.4545454545455, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 [H]
Pfam domain/function: PF00685 Sulfotransfer_1 [H]
EC number: NA
Molecular weight: Translated: 35092; Mature: 35092
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTAKPIKTRELHNHHFDSTIWNELNFRDDDIVISTYAKSGTTWVQQIISQLLFNGEEG CCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC LEVAEMSPWLDLRVPPKEVKLPMVEAQTHRRFLKTHLPVDALTFSEKAKYIYIGRDGRDV CCHHHCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCHHHEECCCCCCEEEEECCCHHH LWSMFNHHSTANQAWYEALNDTPGRVGPAIEKPSGSITEYYHHWLDQDGHPWWSFWENIR HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH SWWAIRNLPNVYFLHFENLKNDMPGEIRRLAEFLGTPIDEDKWESILRHCSFEYMKKNAA HHHHHHCCCCEEEEEECHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KSVPLGGAFWNGGAQTFIHKGTNGRWRDVLSAEDSYKYEHRAAQELDSKCASWLATGEIS CCCCCCCCEECCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC QG CC >Mature Secondary Structure MNNTAKPIKTRELHNHHFDSTIWNELNFRDDDIVISTYAKSGTTWVQQIISQLLFNGEEG CCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC LEVAEMSPWLDLRVPPKEVKLPMVEAQTHRRFLKTHLPVDALTFSEKAKYIYIGRDGRDV CCHHHCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCHHHEECCCCCCEEEEECCCHHH LWSMFNHHSTANQAWYEALNDTPGRVGPAIEKPSGSITEYYHHWLDQDGHPWWSFWENIR HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH SWWAIRNLPNVYFLHFENLKNDMPGEIRRLAEFLGTPIDEDKWESILRHCSFEYMKKNAA HHHHHHCCCCEEEEEECHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KSVPLGGAFWNGGAQTFIHKGTNGRWRDVLSAEDSYKYEHRAAQELDSKCASWLATGEIS CCCCCCCCEECCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC QG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA