| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945499
Identifier: 119945499
GI number: 119945499
Start: 2188379
End: 2189107
Strand: Direct
Name: 119945499
Synonym: Ping_1803
Alternate gene names: NA
Gene position: 2188379-2189107 (Clockwise)
Preceding gene: 119945498
Following gene: 119945500
Centisome position: 47.99
GC content: 41.84
Gene sequence:
>729_bases ATGGATATTAATTTGTTAATTGCGATGTTATTGATTTTTTGTGGCTCTTTTATTCAAAGTGCAACAGGCTTCGGCCTCGC GGTGGTCGCGGCACCTATCTTAATTCATCTGTCTCCTGAATTTATTCCCGGCCCGATTATTATAGTGGGGCTTTTCTTAG GTATTATTAACAGCCTAAGATACCGTGCTAACATTTCATTTGCAGGGCTTAAACATGGCATTATGGGGCGTATTCCAGGT ACTATCGCAGGTGCCGTGTTACTTTTTTATATCAACGTTGCAGAGCTTTCATTATTATTAGGAATAATTGTCTTAATGGC TGTTGTGATTAGCTTACTGCCGATTAAATTAGAGCCGACTCCCCGTAGATTAATGATTGCAGGTTTTTTATCGGGTCTTT TTGGCACAAGCTCTAGCATTGGTGGGCCGCCGATGGCTTTATTATTACAACATCAACAAGCCCATTTAATACGGGCTAAT ATGGCCGCATTTTTTGTGGCGGGCGGGATCATGTCATTATTTGTGCAAATCCCTATTGGTTTTATGACCCTGCATCACCT TTATATATCTCTACCCTTACTACCTGCCGGTTATTTAGGTTATCGCGCCGCACATCATTTTATTGATCGTTTTTCACAAC AAATTGTACGCCGAATGTCACTTGTCTTATGTACAATTTCGGGCTCTGGGGCCCTATTCTCAGGGGTCATATCCATTTGG GGAACGTGA
Upstream 100 bases:
>100_bases TCAAAAAGCGGTGGAGCTACAAAACGTAGACGATACCTAAAAATAACTACTGCGGTTTTACTTTAAAAAAATACAGCAGA TACAATCTTAGCGGGTGAAT
Downstream 100 bases:
>100_bases CTATATATTGATAGCTGCTTTTTTCTTTGTTTATTCAACCACCTTCACTACTATTAAGAAGTCCTATATGCCCGCCAGTT TATGTTTAATTATTGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MDINLLIAMLLIFCGSFIQSATGFGLAVVAAPILIHLSPEFIPGPIIIVGLFLGIINSLRYRANISFAGLKHGIMGRIPG TIAGAVLLFYINVAELSLLLGIIVLMAVVISLLPIKLEPTPRRLMIAGFLSGLFGTSSSIGGPPMALLLQHQQAHLIRAN MAAFFVAGGIMSLFVQIPIGFMTLHHLYISLPLLPAGYLGYRAAHHFIDRFSQQIVRRMSLVLCTISGSGALFSGVISIW GT
Sequences:
>Translated_242_residues MDINLLIAMLLIFCGSFIQSATGFGLAVVAAPILIHLSPEFIPGPIIIVGLFLGIINSLRYRANISFAGLKHGIMGRIPG TIAGAVLLFYINVAELSLLLGIIVLMAVVISLLPIKLEPTPRRLMIAGFLSGLFGTSSSIGGPPMALLLQHQQAHLIRAN MAAFFVAGGIMSLFVQIPIGFMTLHHLYISLPLLPAGYLGYRAAHHFIDRFSQQIVRRMSLVLCTISGSGALFSGVISIW GT >Mature_242_residues MDINLLIAMLLIFCGSFIQSATGFGLAVVAAPILIHLSPEFIPGPIIIVGLFLGIINSLRYRANISFAGLKHGIMGRIPG TIAGAVLLFYINVAELSLLLGIIVLMAVVISLLPIKLEPTPRRLMIAGFLSGLFGTSSSIGGPPMALLLQHQQAHLIRAN MAAFFVAGGIMSLFVQIPIGFMTLHHLYISLPLLPAGYLGYRAAHHFIDRFSQQIVRRMSLVLCTISGSGALFSGVISIW GT
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25889; Mature: 25889
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINLLIAMLLIFCGSFIQSATGFGLAVVAAPILIHLSPEFIPGPIIIVGLFLGIINSLR CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YRANISFAGLKHGIMGRIPGTIAGAVLLFYINVAELSLLLGIIVLMAVVISLLPIKLEPT HHCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRRLMIAGFLSGLFGTSSSIGGPPMALLLQHQQAHLIRANMAAFFVAGGIMSLFVQIPIG CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMTLHHLYISLPLLPAGYLGYRAAHHFIDRFSQQIVRRMSLVLCTISGSGALFSGVISIW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHC GT CC >Mature Secondary Structure MDINLLIAMLLIFCGSFIQSATGFGLAVVAAPILIHLSPEFIPGPIIIVGLFLGIINSLR CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YRANISFAGLKHGIMGRIPGTIAGAVLLFYINVAELSLLLGIIVLMAVVISLLPIKLEPT HHCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRRLMIAGFLSGLFGTSSSIGGPPMALLLQHQQAHLIRANMAAFFVAGGIMSLFVQIPIG CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMTLHHLYISLPLLPAGYLGYRAAHHFIDRFSQQIVRRMSLVLCTISGSGALFSGVISIW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHC GT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA