Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119945493

Identifier: 119945493

GI number: 119945493

Start: 2180713

End: 2180931

Strand: Direct

Name: 119945493

Synonym: Ping_1795

Alternate gene names: NA

Gene position: 2180713-2180931 (Clockwise)

Preceding gene: 119945492

Following gene: 119945494

Centisome position: 47.83

GC content: 34.7

Gene sequence:

>219_bases
ATGACTAATAAATTTAACTTTAACGATGCAGTTAAAGAGCTTCCAGCAGGTAAAAACCTTAATGGTAAAGATGGTGTACT
CACATCTATCATCAAACAGTTAACTAAAGCAGCACTTCAAGCTGAAATAGAACAACACCTCATTAATGATCAACACCCTA
ATCGTCAAAATGGCTCTGCAAGAAATCTATGGTGCCAGGTCTTTAATTTTCACTTTTAA

Upstream 100 bases:

>100_bases
GAAAGTTATTGTTGAAGGGGCTGATGAGCAGTAATGTAAATAAATGGGGTGTTCAAAAATCTGTGTCATTTCAGTAAAAT
AAACTAAAAAGGAATGACAC

Downstream 100 bases:

>100_bases
TAAATTGCAAGTTGAATTTCTAAGGCGCTTTGCTAGACAGCTTTATTTCTAGGGTGCCTGACAAATTAAATGTAGCCACT
ACACTGTTACCTCTGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase Mutator Type; ISSod4 Transposase

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTNKFNFNDAVKELPAGKNLNGKDGVLTSIIKQLTKAALQAEIEQHLINDQHPNRQNGSARNLWCQVFNFHF

Sequences:

>Translated_72_residues
MTNKFNFNDAVKELPAGKNLNGKDGVLTSIIKQLTKAALQAEIEQHLINDQHPNRQNGSARNLWCQVFNFHF
>Mature_71_residues
TNKFNFNDAVKELPAGKNLNGKDGVLTSIIKQLTKAALQAEIEQHLINDQHPNRQNGSARNLWCQVFNFHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8178; Mature: 8047

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKFNFNDAVKELPAGKNLNGKDGVLTSIIKQLTKAALQAEIEQHLINDQHPNRQNGSA
CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RNLWCQVFNFHF
HHHHHHHHHCCC
>Mature Secondary Structure 
TNKFNFNDAVKELPAGKNLNGKDGVLTSIIKQLTKAALQAEIEQHLINDQHPNRQNGSA
CCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RNLWCQVFNFHF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA