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The map label for this gene is ybjT [H]

Identifier: 119945474

GI number: 119945474

Start: 2153824

End: 2155260

Strand: Direct

Name: ybjT [H]

Synonym: Ping_1772

Alternate gene names: 119945474

Gene position: 2153824-2155260 (Clockwise)

Preceding gene: 119945473

Following gene: 119945475

Centisome position: 47.24

GC content: 40.78

Gene sequence:

>1437_bases
ATGACAAAAAACATTTTGGTGGTGGGGGCCTCGGGTTATGTGGGTAGTCAACTCGTCCCGGCGCTTGCGCAGACAGGTTA
TAACGTCACAGCGACAGCGCGGGATCCCGCGGTACTTGCAAAACGGAGTTGGAGCCGACTCGATAATATTAAAATAGTGA
CATTAGATTTAACCCTTAATACAGATTTATCCCTTATTCTGCAGGATATTGATATTGTTTTTTATCTTGTGCATAGCATG
GGCTATGGCCCGAATTTTGTTGATATTGAACTTGATAACGCTAAAAATTTCAGTGCACAGTTAAAAGCCAGTGATGTTAA
ACAGCTTATCTATTTAGGCTCTCTGCAACCTGCTTCCAGCGATTCCAAGCATTTTGTTTCACGTAAAAAAACCGGTGATA
TTTTAAGAGAAAGCAATGTTATCGTCACTGAATTAAGAGCTGGCATTATTGTAGGTGCGGGCTCTGCAGTATTTGAAGTG
ATGCGTGATGTGGTTTATCACCTGCCTGTTATGATCATGCCAAAGTGCATAAATTCTCACAACTCACCTATTGCCTTACA
AAATCTGCTCTATTACCTGCTGGCGTTACTCAAACTTCCTGCCGTCACGCATAAAATTTTTGATGTTGCAGGCCCGGAGT
TAATTACCTATCAAAAACAGCTACAAATAATTGCCAATTTGATGGGTAAAAAAGTACATATTATCCCCCTGTCAATGTTA
ACAACTAAGGTTGCTGCCCTCGGGTTTAAAGTTATCACCTCGGTGCCGACCAATATTGCCAAAGCATTGGTGGAGGGAAT
GTGCTATGACTTAACGGCCGACGGATCCGAACTCCAGTCTCTTATTCCACAAGCATTACTTTCTTATGAACAAGCCGTGG
CTGAAAGCTTAGCCAATGAACAAGATATTATTAATAGTGACCTATGGGGATTTGATCCCGATGCGCTTTCTTATTGGCAA
CCAGGTTATGCTTATTATCCAAAGCAAGCGGGTCATTGTTTTAAAACCGATGTCAGTGCTGAATGCCTTTGGCAGCAGAT
TCAATTAATCGGTACGCAGGAAGGTTATTTTTATGCAAATTATTTATGGCGAATCAGAGAAGGGATAGATCACCTTGCTG
GTGGGAATTCCTTAACGCGTTATCGTAGCCATCCTGATAAAATAGCATTAGGTGATAGAATTGACTCCTGGAAAGTTATT
GGCATTAAAGAGAATAAATTTTTGTCTTTATTAATGGGCATGAAAGCACCAGGATTGGGTCGACTTGAATTTAATATTGT
GGATAAAGGGGCATATCGGGAGTTAGATATACGTGCCTGGTGGCATCCGGCAGGTTTTTTAGGCTTATTATATTGGTTTG
CACTGATGCCCGCACACTTATTTATTTTCAAGGGAATGACAAAAGCTATAGTGAAAAAATGCAAAACTAAAATGTAA

Upstream 100 bases:

>100_bases
GGAATAACCGTTTTCATTATGTGACCCTTGTACCAGTATTCAGGCGCACCGCTGCATCTTCAATCTGTGATCATAAACAA
TATAAGAAGGATGCTTATTA

Downstream 100 bases:

>100_bases
TCTTATTGATAGCAATGGTTTGCTTAAATCACCATTTTACGCAAAAAATAAAAGGTTGCCCCTAACCGATAGGATGATGA
CCTATAATGATTTGTCATCA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTKNILVVGASGYVGSQLVPALAQTGYNVTATARDPAVLAKRSWSRLDNIKIVTLDLTLNTDLSLILQDIDIVFYLVHSM
GYGPNFVDIELDNAKNFSAQLKASDVKQLIYLGSLQPASSDSKHFVSRKKTGDILRESNVIVTELRAGIIVGAGSAVFEV
MRDVVYHLPVMIMPKCINSHNSPIALQNLLYYLLALLKLPAVTHKIFDVAGPELITYQKQLQIIANLMGKKVHIIPLSML
TTKVAALGFKVITSVPTNIAKALVEGMCYDLTADGSELQSLIPQALLSYEQAVAESLANEQDIINSDLWGFDPDALSYWQ
PGYAYYPKQAGHCFKTDVSAECLWQQIQLIGTQEGYFYANYLWRIREGIDHLAGGNSLTRYRSHPDKIALGDRIDSWKVI
GIKENKFLSLLMGMKAPGLGRLEFNIVDKGAYRELDIRAWWHPAGFLGLLYWFALMPAHLFIFKGMTKAIVKKCKTKM

Sequences:

>Translated_478_residues
MTKNILVVGASGYVGSQLVPALAQTGYNVTATARDPAVLAKRSWSRLDNIKIVTLDLTLNTDLSLILQDIDIVFYLVHSM
GYGPNFVDIELDNAKNFSAQLKASDVKQLIYLGSLQPASSDSKHFVSRKKTGDILRESNVIVTELRAGIIVGAGSAVFEV
MRDVVYHLPVMIMPKCINSHNSPIALQNLLYYLLALLKLPAVTHKIFDVAGPELITYQKQLQIIANLMGKKVHIIPLSML
TTKVAALGFKVITSVPTNIAKALVEGMCYDLTADGSELQSLIPQALLSYEQAVAESLANEQDIINSDLWGFDPDALSYWQ
PGYAYYPKQAGHCFKTDVSAECLWQQIQLIGTQEGYFYANYLWRIREGIDHLAGGNSLTRYRSHPDKIALGDRIDSWKVI
GIKENKFLSLLMGMKAPGLGRLEFNIVDKGAYRELDIRAWWHPAGFLGLLYWFALMPAHLFIFKGMTKAIVKKCKTKM
>Mature_477_residues
TKNILVVGASGYVGSQLVPALAQTGYNVTATARDPAVLAKRSWSRLDNIKIVTLDLTLNTDLSLILQDIDIVFYLVHSMG
YGPNFVDIELDNAKNFSAQLKASDVKQLIYLGSLQPASSDSKHFVSRKKTGDILRESNVIVTELRAGIIVGAGSAVFEVM
RDVVYHLPVMIMPKCINSHNSPIALQNLLYYLLALLKLPAVTHKIFDVAGPELITYQKQLQIIANLMGKKVHIIPLSMLT
TKVAALGFKVITSVPTNIAKALVEGMCYDLTADGSELQSLIPQALLSYEQAVAESLANEQDIINSDLWGFDPDALSYWQP
GYAYYPKQAGHCFKTDVSAECLWQQIQLIGTQEGYFYANYLWRIREGIDHLAGGNSLTRYRSHPDKIALGDRIDSWKVIG
IKENKFLSLLMGMKAPGLGRLEFNIVDKGAYRELDIRAWWHPAGFLGLLYWFALMPAHLFIFKGMTKAIVKKCKTKM

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=473, Percent_Identity=48.6257928118393, Blast_Score=460, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53150; Mature: 53018

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNILVVGASGYVGSQLVPALAQTGYNVTATARDPAVLAKRSWSRLDNIKIVTLDLTLN
CCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEEEEEC
TDLSLILQDIDIVFYLVHSMGYGPNFVDIELDNAKNFSAQLKASDVKQLIYLGSLQPASS
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHCCCCCCCC
DSKHFVSRKKTGDILRESNVIVTELRAGIIVGAGSAVFEVMRDVVYHLPVMIMPKCINSH
CCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCC
NSPIALQNLLYYLLALLKLPAVTHKIFDVAGPELITYQKQLQIIANLMGKKVHIIPLSML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHH
TTKVAALGFKVITSVPTNIAKALVEGMCYDLTADGSELQSLIPQALLSYEQAVAESLANE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
QDIINSDLWGFDPDALSYWQPGYAYYPKQAGHCFKTDVSAECLWQQIQLIGTQEGYFYAN
HHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCEEHHH
YLWRIREGIDHLAGGNSLTRYRSHPDKIALGDRIDSWKVIGIKENKFLSLLMGMKAPGLG
HHHHHHHHHHHHCCCCCCHHHCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCC
RLEFNIVDKGAYRELDIRAWWHPAGFLGLLYWFALMPAHLFIFKGMTKAIVKKCKTKM
EEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKNILVVGASGYVGSQLVPALAQTGYNVTATARDPAVLAKRSWSRLDNIKIVTLDLTLN
CCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEEEEEC
TDLSLILQDIDIVFYLVHSMGYGPNFVDIELDNAKNFSAQLKASDVKQLIYLGSLQPASS
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHCCCCCCCC
DSKHFVSRKKTGDILRESNVIVTELRAGIIVGAGSAVFEVMRDVVYHLPVMIMPKCINSH
CCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCC
NSPIALQNLLYYLLALLKLPAVTHKIFDVAGPELITYQKQLQIIANLMGKKVHIIPLSML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHH
TTKVAALGFKVITSVPTNIAKALVEGMCYDLTADGSELQSLIPQALLSYEQAVAESLANE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
QDIINSDLWGFDPDALSYWQPGYAYYPKQAGHCFKTDVSAECLWQQIQLIGTQEGYFYAN
HHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCEEHHH
YLWRIREGIDHLAGGNSLTRYRSHPDKIALGDRIDSWKVIGIKENKFLSLLMGMKAPGLG
HHHHHHHHHHHHCCCCCCHHHCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCC
RLEFNIVDKGAYRELDIRAWWHPAGFLGLLYWFALMPAHLFIFKGMTKAIVKKCKTKM
EEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]