| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is zraR [C]
Identifier: 119945450
GI number: 119945450
Start: 2129658
End: 2130050
Strand: Direct
Name: zraR [C]
Synonym: Ping_1747
Alternate gene names: 119945450
Gene position: 2129658-2130050 (Clockwise)
Preceding gene: 119945449
Following gene: 119945451
Centisome position: 46.71
GC content: 39.95
Gene sequence:
>393_bases ATGAAATCGTCATCACGGCTTACCATTGACTGCCTCATTGTAGATGATGAGCCCGGCATCGCTTGGGTTATGGAACATAT ATTGCGGAGTCAGGGTTACACTGTAGTCAGTGTCCAAACTGGCGATGAGGCATTGAATGCAGTGAAAGAACAGGATTTTA GATTGATTTTTATGGATGCTAAATTACCCGATATCGAAGGTTTAGTGCTGGCGCGTAAGTTGCGAAGTATTAAACTAGAA ATGCCGATTATTATGGTCTCCGGTTATTATTATTCTGACGATCCTGCCATTATTCAGGCGATTGAAAGCAATCTTATTTT AAAGTTCATTGCCAAGCCATTTACTAATAGTCATATTATTGCCGCCTTAGAAGGTTTGCCAAATTTCAGATAA
Upstream 100 bases:
>100_bases TCTCTCTCTGTTATTCGATTGTTAAACAACATAGGGGGAGTATTAGCGTGGATAGCATGGTGGGTAAGGGAAGCACTTTC ACAGTATTGCTACCAATATT
Downstream 100 bases:
>100_bases AATAATACGACAGTTATACCCACCAATATACCCAGAAGAATGATTTTAGATTCAAGTGATGATCTCATTTCGCATTTGAA GTAGGGTGGAAATTCCAGAG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Two Component Fis Family Transcriptional Regulator; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; Multi-Sensor Hybrid Histidine Kinase; Multi-Component Transcriptional Regulator; Stage 0 Sporulation Protein F; CheY-Like Chemotaxis Protein Response Regulator Receiver; Signal Transduction Histidine Kinase; Cell Cycle Transcriptional Regulator CtrA; Acetoacetate Metabolism Regulatory Protein AtoC; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKSSSRLTIDCLIVDDEPGIAWVMEHILRSQGYTVVSVQTGDEALNAVKEQDFRLIFMDAKLPDIEGLVLARKLRSIKLE MPIIMVSGYYYSDDPAIIQAIESNLILKFIAKPFTNSHIIAALEGLPNFR
Sequences:
>Translated_130_residues MKSSSRLTIDCLIVDDEPGIAWVMEHILRSQGYTVVSVQTGDEALNAVKEQDFRLIFMDAKLPDIEGLVLARKLRSIKLE MPIIMVSGYYYSDDPAIIQAIESNLILKFIAKPFTNSHIIAALEGLPNFR >Mature_130_residues MKSSSRLTIDCLIVDDEPGIAWVMEHILRSQGYTVVSVQTGDEALNAVKEQDFRLIFMDAKLPDIEGLVLARKLRSIKLE MPIIMVSGYYYSDDPAIIQAIESNLILKFIAKPFTNSHIIAALEGLPNFR
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=26.4957264957265, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14597; Mature: 14597
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSSRLTIDCLIVDDEPGIAWVMEHILRSQGYTVVSVQTGDEALNAVKEQDFRLIFMDA CCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEEEEEC KLPDIEGLVLARKLRSIKLEMPIIMVSGYYYSDDPAIIQAIESNLILKFIAKPFTNSHII CCCCCHHHHHHHHHHHEEECCCEEEEECEEECCCHHHHHHHHHHHHEEEHHCCCCCCEEE AALEGLPNFR EEECCCCCCC >Mature Secondary Structure MKSSSRLTIDCLIVDDEPGIAWVMEHILRSQGYTVVSVQTGDEALNAVKEQDFRLIFMDA CCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEEEEEC KLPDIEGLVLARKLRSIKLEMPIIMVSGYYYSDDPAIIQAIESNLILKFIAKPFTNSHII CCCCCHHHHHHHHHHHEEECCCEEEEECEEECCCHHHHHHHHHHHHEEEHHCCCCCCEEE AALEGLPNFR EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA