Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119945439

Identifier: 119945439

GI number: 119945439

Start: 2113734

End: 2114663

Strand: Direct

Name: 119945439

Synonym: Ping_1736

Alternate gene names: NA

Gene position: 2113734-2114663 (Clockwise)

Preceding gene: 119945438

Following gene: 119945441

Centisome position: 46.36

GC content: 43.66

Gene sequence:

>930_bases
ATGTTATCCGGCTGCGCTTCTTTTATGGCACAAAAATCTTCAGTTTCCTCGCGGCCGACAGCAGTCACTACCTATTTTGA
CTATCGGATAGTCTCAGCAAACAATAAGGCCATCACCCTTCAGGATTTGTCGCGTGAGATCAAAAATGCCAACGTGGTGC
TGATTGGCGAGTGGCATACTCACAGTGGTATTCATCGTTTTGAAACGGATCTGTTGCGGGCTCTGTTTGTGCAGAATCCA
AATGTAACACTCTCTATGGAGCAATTTTCGCGCGACAGCCAAGAAATTGTGAATCAATACCTGGCGGGTGAAATAGGTGA
AACAACATTGATAAAGCAAGCTAACACATGGCCGAACTACGAAAGTGATTATCGTCCTTTAGTTGAATTCGCAAAATTTA
ATAAACTTGATCTTATTGCCGGCAATGCACCTAATAATATTGTCAGTTGTATCGGTAGAGAGGGGATCGAGTATATTAAT
AGATTACCCGAAAAACAGCGATCCTGGCTAGCCGAGCGTATTTCCACAAAAGACAGTGCATATAAAAATCACTTTCTGGC
CTCCATGCATCATGGTGATGAAATACAAAATAACCAACAATTTGCAGCGCAAATGGCCTGGGATGAGACAATGGCAGAAA
GTATCGTACGCTATTTAGATGTACACCCTGACAAGCAGGTTATGCACATTGCCGGTAACTTCCATGTTGAAAATGGCCTG
GGGATTGCGGCTGGCATTCTGCGCAGAGATGCTGATTTAAAGGTAGTGATAGTGACACCGGTCAGTGCTCAACGGGCGCT
GGAGAAAGGCGTTGGCGACTACCGCCTGCAGGTTATACCACCCCCGCAAAAATTCGTAAAAAACGATAACAGGATAACTT
ATTTCAAGTCACTTTCAGTGCGTAATAATAACTTACAATGTATTCAGTAA

Upstream 100 bases:

>100_bases
ACTAACTCGCCGGACAGTTATCAGGAGAGCACTTATTTTTTATTTTAACAAGTTATTCACCCATTATATAAGATGCAGTA
TTAATTTAGGCCTATTCATA

Downstream 100 bases:

>100_bases
GGGCATTATTCGTTGGACTTTATTCAAAAAACAGATTCTAGAATGATACCAAAAGCATTAAGTTTATGATCACTTTATTA
ATGCATTTGGGATAAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLSGCASFMAQKSSVSSRPTAVTTYFDYRIVSANNKAITLQDLSREIKNANVVLIGEWHTHSGIHRFETDLLRALFVQNP
NVTLSMEQFSRDSQEIVNQYLAGEIGETTLIKQANTWPNYESDYRPLVEFAKFNKLDLIAGNAPNNIVSCIGREGIEYIN
RLPEKQRSWLAERISTKDSAYKNHFLASMHHGDEIQNNQQFAAQMAWDETMAESIVRYLDVHPDKQVMHIAGNFHVENGL
GIAAGILRRDADLKVVIVTPVSAQRALEKGVGDYRLQVIPPPQKFVKNDNRITYFKSLSVRNNNLQCIQ

Sequences:

>Translated_309_residues
MLSGCASFMAQKSSVSSRPTAVTTYFDYRIVSANNKAITLQDLSREIKNANVVLIGEWHTHSGIHRFETDLLRALFVQNP
NVTLSMEQFSRDSQEIVNQYLAGEIGETTLIKQANTWPNYESDYRPLVEFAKFNKLDLIAGNAPNNIVSCIGREGIEYIN
RLPEKQRSWLAERISTKDSAYKNHFLASMHHGDEIQNNQQFAAQMAWDETMAESIVRYLDVHPDKQVMHIAGNFHVENGL
GIAAGILRRDADLKVVIVTPVSAQRALEKGVGDYRLQVIPPPQKFVKNDNRITYFKSLSVRNNNLQCIQ
>Mature_309_residues
MLSGCASFMAQKSSVSSRPTAVTTYFDYRIVSANNKAITLQDLSREIKNANVVLIGEWHTHSGIHRFETDLLRALFVQNP
NVTLSMEQFSRDSQEIVNQYLAGEIGETTLIKQANTWPNYESDYRPLVEFAKFNKLDLIAGNAPNNIVSCIGREGIEYIN
RLPEKQRSWLAERISTKDSAYKNHFLASMHHGDEIQNNQQFAAQMAWDETMAESIVRYLDVHPDKQVMHIAGNFHVENGL
GIAAGILRRDADLKVVIVTPVSAQRALEKGVGDYRLQVIPPPQKFVKNDNRITYFKSLSVRNNNLQCIQ

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34984; Mature: 34984

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGCASFMAQKSSVSSRPTAVTTYFDYRIVSANNKAITLQDLSREIKNANVVLIGEWHT
CCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHCCCCEEEEECCCC
HSGIHRFETDLLRALFVQNPNVTLSMEQFSRDSQEIVNQYLAGEIGETTLIKQANTWPNY
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
ESDYRPLVEFAKFNKLDLIAGNAPNNIVSCIGREGIEYINRLPEKQRSWLAERISTKDSA
CCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
YKNHFLASMHHGDEIQNNQQFAAQMAWDETMAESIVRYLDVHPDKQVMHIAGNFHVENGL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCC
GIAAGILRRDADLKVVIVTPVSAQRALEKGVGDYRLQVIPPPQKFVKNDNRITYFKSLSV
CHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCCCEEEEEEEEEE
RNNNLQCIQ
ECCCCEEEC
>Mature Secondary Structure
MLSGCASFMAQKSSVSSRPTAVTTYFDYRIVSANNKAITLQDLSREIKNANVVLIGEWHT
CCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHCCCCEEEEECCCC
HSGIHRFETDLLRALFVQNPNVTLSMEQFSRDSQEIVNQYLAGEIGETTLIKQANTWPNY
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
ESDYRPLVEFAKFNKLDLIAGNAPNNIVSCIGREGIEYINRLPEKQRSWLAERISTKDSA
CCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
YKNHFLASMHHGDEIQNNQQFAAQMAWDETMAESIVRYLDVHPDKQVMHIAGNFHVENGL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCC
GIAAGILRRDADLKVVIVTPVSAQRALEKGVGDYRLQVIPPPQKFVKNDNRITYFKSLSV
CHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCCCEEEEEEEEEE
RNNNLQCIQ
ECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA