| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945302
Identifier: 119945302
GI number: 119945302
Start: 1939285
End: 1940046
Strand: Reverse
Name: 119945302
Synonym: Ping_1585
Alternate gene names: NA
Gene position: 1940046-1939285 (Counterclockwise)
Preceding gene: 119945311
Following gene: 119945300
Centisome position: 42.55
GC content: 36.09
Gene sequence:
>762_bases ATGTTAACTGATTGGGAAGCATTAACTCAGCGTTTTATAAATGAGCATGCTCGTAACGAAATATCTGTCAAAGCTTGGTG TAAACAGACAAATATTAATTACGCTAGCGCGCGACGACATATCAAAGTAAATGAAAAAAATACGCAGTACAGAGTGCGCA AACTACGCGCAGCACAAAATGACAAATGCACTCGCAAAACAACAGTTCCAAAAAGTTATAAGCATAAAATTCAATCGGTT AACAAAAATAAAAGTGATACTTTTGCAAACACTGCCCTCTTGAAAAAACCGCCACCACAGAAACGAGTAGCGTCACTTGG TAATCAAAATGCACGAAAATTTGGCCATTACAGTACATTCCTCTGCACGAATGAAGATGTCCGACGATACTTATCTGCTT CAACAGCATCATTAAGTGATGAGCTTAATTTGGTGCGTATACAACTATTACACACGATGGTTATTGTTAAGCAAATCGAT TCAGACCTAAAAGATGATATTACAGCCGCGAAAAAGAACAATTTACAGATTATGCATGACAAATTTTATATTCATGAGGA CAACCAAATAGCACGTATCGAATCATTAGAGATGTCGCTGCTTAAGCAAGAAAAAATGAAAGCTGATACAGAAAGAGCCA TCATATTAACAAACAAGTTCGAACTGCAAATTGATAAATTAAATCGGGAAATAGCTGCGAACAAACCAAAAATTGATGAA GTATATTACGAGATTATGAAATTAGATGGGCCAATCGAATGA
Upstream 100 bases:
>100_bases AAAAAGCGGATTTATAGGGTTTAGCAACTACATATAGATTAAAATGTTGTTTACGGCATTTTATATGTGTATTTTTTGAA AAGTTATTGGTGAGGTTGTC
Downstream 100 bases:
>100_bases GTAAATACTAGGCTAACCATTTATGTGTAAAGGTTATATGCGTTGGCACTAAATAGTGCCTTATTACCTGATGGGAATAT CACCTACGTTTCTAGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLTDWEALTQRFINEHARNEISVKAWCKQTNINYASARRHIKVNEKNTQYRVRKLRAAQNDKCTRKTTVPKSYKHKIQSV NKNKSDTFANTALLKKPPPQKRVASLGNQNARKFGHYSTFLCTNEDVRRYLSASTASLSDELNLVRIQLLHTMVIVKQID SDLKDDITAAKKNNLQIMHDKFYIHEDNQIARIESLEMSLLKQEKMKADTERAIILTNKFELQIDKLNREIAANKPKIDE VYYEIMKLDGPIE
Sequences:
>Translated_253_residues MLTDWEALTQRFINEHARNEISVKAWCKQTNINYASARRHIKVNEKNTQYRVRKLRAAQNDKCTRKTTVPKSYKHKIQSV NKNKSDTFANTALLKKPPPQKRVASLGNQNARKFGHYSTFLCTNEDVRRYLSASTASLSDELNLVRIQLLHTMVIVKQID SDLKDDITAAKKNNLQIMHDKFYIHEDNQIARIESLEMSLLKQEKMKADTERAIILTNKFELQIDKLNREIAANKPKIDE VYYEIMKLDGPIE >Mature_253_residues MLTDWEALTQRFINEHARNEISVKAWCKQTNINYASARRHIKVNEKNTQYRVRKLRAAQNDKCTRKTTVPKSYKHKIQSV NKNKSDTFANTALLKKPPPQKRVASLGNQNARKFGHYSTFLCTNEDVRRYLSASTASLSDELNLVRIQLLHTMVIVKQID SDLKDDITAAKKNNLQIMHDKFYIHEDNQIARIESLEMSLLKQEKMKADTERAIILTNKFELQIDKLNREIAANKPKIDE VYYEIMKLDGPIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29447; Mature: 29447
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDWEALTQRFINEHARNEISVKAWCKQTNINYASARRHIKVNEKNTQYRVRKLRAAQN CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCEEEECCCCHHHHHHHHHHHCC DKCTRKTTVPKSYKHKIQSVNKNKSDTFANTALLKKPPPQKRVASLGNQNARKFGHYSTF CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCEEEE LCTNEDVRRYLSASTASLSDELNLVRIQLLHTMVIVKQIDSDLKDDITAAKKNNLQIMHD EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KFYIHEDNQIARIESLEMSLLKQEKMKADTERAIILTNKFELQIDKLNREIAANKPKIDE EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHCCCCCHHH VYYEIMKLDGPIE HHHHHHHCCCCCC >Mature Secondary Structure MLTDWEALTQRFINEHARNEISVKAWCKQTNINYASARRHIKVNEKNTQYRVRKLRAAQN CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCEEEECCCCHHHHHHHHHHHCC DKCTRKTTVPKSYKHKIQSVNKNKSDTFANTALLKKPPPQKRVASLGNQNARKFGHYSTF CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCEEEE LCTNEDVRRYLSASTASLSDELNLVRIQLLHTMVIVKQIDSDLKDDITAAKKNNLQIMHD EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KFYIHEDNQIARIESLEMSLLKQEKMKADTERAIILTNKFELQIDKLNREIAANKPKIDE EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHCCCCCHHH VYYEIMKLDGPIE HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA