Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119945272

Identifier: 119945272

GI number: 119945272

Start: 1893992

End: 1894465

Strand: Direct

Name: 119945272

Synonym: Ping_1545

Alternate gene names: NA

Gene position: 1893992-1894465 (Clockwise)

Preceding gene: 119945271

Following gene: 119945273

Centisome position: 41.54

GC content: 34.6

Gene sequence:

>474_bases
ATGGGATTATTTAGTTCAAAAACAGGAACAACAGATCAACATTCAACTGCAACTGTTATCGCAACTGGATGCAGCATTAC
TGGTACAGTCCAATTAGCATGCGACATTCAAATTGACGGTGAAGTTGAAGGGAAAATAATCTCTGAAAAATCAATTGTCA
TTAGCCATTCAGGTAAGGTCAAAGGCGAAGTTTATGCTAATAATGTCATCATTAATGGCACTCTAGAGGGAACTGTTCAC
GCAGATAGCATAGAAATTTTAGAGAAAGGTCAAATTAATGGATCGATATACACTGATAAGTTAAGTATCGATAAAGGGGG
ATTATTCCTAGGCAATACTAATCCTAGAAAAAATGATCAAGTAACTAGCATCAGTAGTAACGAAAAAGAAATGTTGATAA
AGCCTGAGAACAAAAGTAGTCACGAAAAAGAAATGTTGATAAAGCCTGAGAGCAAAAAAAACATCAATAAATAA

Upstream 100 bases:

>100_bases
ATGAAATTCGTTTTGTAGGACGAGCCTTAGATCCACTCAATTTCGTGAGATGGAATAATGATAACTTCGATACAATATAT
GAAAAAGAAAAGGGAATAAA

Downstream 100 bases:

>100_bases
CAAAGATTAATATGTCTTAGACAGTCATCGTCACTAAAATCAATGGGGTTAGGCATTTAATGCCGATCAGTTAAGAAAAA
TCTATTGATTTTTAGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGLFSSKTGTTDQHSTATVIATGCSITGTVQLACDIQIDGEVEGKIISEKSIVISHSGKVKGEVYANNVIINGTLEGTVH
ADSIEILEKGQINGSIYTDKLSIDKGGLFLGNTNPRKNDQVTSISSNEKEMLIKPENKSSHEKEMLIKPESKKNINK

Sequences:

>Translated_157_residues
MGLFSSKTGTTDQHSTATVIATGCSITGTVQLACDIQIDGEVEGKIISEKSIVISHSGKVKGEVYANNVIINGTLEGTVH
ADSIEILEKGQINGSIYTDKLSIDKGGLFLGNTNPRKNDQVTSISSNEKEMLIKPENKSSHEKEMLIKPESKKNINK
>Mature_156_residues
GLFSSKTGTTDQHSTATVIATGCSITGTVQLACDIQIDGEVEGKIISEKSIVISHSGKVKGEVYANNVIINGTLEGTVHA
DSIEILEKGQINGSIYTDKLSIDKGGLFLGNTNPRKNDQVTSISSNEKEMLIKPENKSSHEKEMLIKPESKKNINK

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16860; Mature: 16729

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFSSKTGTTDQHSTATVIATGCSITGTVQLACDIQIDGEVEGKIISEKSIVISHSGKV
CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCEEECCCEEEEEECCCE
KGEVYANNVIINGTLEGTVHADSIEILEKGQINGSIYTDKLSIDKGGLFLGNTNPRKNDQ
EEEEEECCEEEEEEECCEEECCEEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCCE
VTSISSNEKEMLIKPENKSSHEKEMLIKPESKKNINK
EEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
GLFSSKTGTTDQHSTATVIATGCSITGTVQLACDIQIDGEVEGKIISEKSIVISHSGKV
CCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCEEECCCEEEEEECCCE
KGEVYANNVIINGTLEGTVHADSIEILEKGQINGSIYTDKLSIDKGGLFLGNTNPRKNDQ
EEEEEECCEEEEEEECCEEECCEEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCCE
VTSISSNEKEMLIKPENKSSHEKEMLIKPESKKNINK
EEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA