| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945266
Identifier: 119945266
GI number: 119945266
Start: 1884745
End: 1885179
Strand: Direct
Name: 119945266
Synonym: Ping_1538
Alternate gene names: NA
Gene position: 1884745-1885179 (Clockwise)
Preceding gene: 119945262
Following gene: 119945267
Centisome position: 41.34
GC content: 35.4
Gene sequence:
>435_bases ATGATTAATTTAACGGATATATTTTGTGATGTAGATGATTTTTGCAACGTTTTTATCCCCGAGTGGGAAGCGTGTTTAAT AAGCAATGGTGGGATAAAAAGACGAAGAGTCAAGTGTATGAATAATGCAGAAATAATGACAATTATCATTAGCTTTCATC AATCTCATTACAGAGATTTCAAAAATTATTACTTAGGCTATGTCGCAAGGCATTTAAAAGAATATTTCCCCTCATTACTG AGCTATACAAGGTTTATAGAGGTTATGCCATCTGTCATCATTCCTTTGAATACCTATCTAACGACATTATTTGGCAAGCC AACGGGGATTGCTTTTGTTGACTCCACAAAATTTGCGGTATGCCATAGTATTAGAGCAAAACGTAACAAGGTTTTTAACG GAACGGCCAAGCATGCGAAAGGTAAGGATAAGTAA
Upstream 100 bases:
>100_bases TTAACCTGAATTAGTGATAAGAATTAAAATAAATTGAACTTAATGCCTATTTGACGATCTGATCTTTTAACTAAAAAATC AGATATAAAAAGGGACTGAC
Downstream 100 bases:
>100_bases GTGGGATAAAGCGATGCTCAGCACACGTTATCTTATCGAAATAATTAATAATTAATAATTAATAATCAAGTGAAAAATAT TTCATATGTAGAGCAAACTC
Product: transposase, IS4
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Protease; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MINLTDIFCDVDDFCNVFIPEWEACLISNGGIKRRRVKCMNNAEIMTIIISFHQSHYRDFKNYYLGYVARHLKEYFPSLL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFVDSTKFAVCHSIRAKRNKVFNGTAKHAKGKDK
Sequences:
>Translated_144_residues MINLTDIFCDVDDFCNVFIPEWEACLISNGGIKRRRVKCMNNAEIMTIIISFHQSHYRDFKNYYLGYVARHLKEYFPSLL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFVDSTKFAVCHSIRAKRNKVFNGTAKHAKGKDK >Mature_144_residues MINLTDIFCDVDDFCNVFIPEWEACLISNGGIKRRRVKCMNNAEIMTIIISFHQSHYRDFKNYYLGYVARHLKEYFPSLL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFVDSTKFAVCHSIRAKRNKVFNGTAKHAKGKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16641
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTDIFCDVDDFCNVFIPEWEACLISNGGIKRRRVKCMNNAEIMTIIISFHQSHYRDF CCCHHHHHCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH KNYYLGYVARHLKEYFPSLLSYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFVDSTKFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH CHSIRAKRNKVFNGTAKHAKGKDK HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MINLTDIFCDVDDFCNVFIPEWEACLISNGGIKRRRVKCMNNAEIMTIIISFHQSHYRDF CCCHHHHHCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH KNYYLGYVARHLKEYFPSLLSYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFVDSTKFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH CHSIRAKRNKVFNGTAKHAKGKDK HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA