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The map label for this gene is 119945262

Identifier: 119945262

GI number: 119945262

Start: 1880892

End: 1881314

Strand: Direct

Name: 119945262

Synonym: Ping_1533

Alternate gene names: NA

Gene position: 1880892-1881314 (Clockwise)

Preceding gene: 119945261

Following gene: 119945266

Centisome position: 41.25

GC content: 36.41

Gene sequence:

>423_bases
ATGAACAACATAATACCAAGAAAGCAATGGTTAAGCCCTGAACATATTTTGGACGATTTTTTTGCCTTAAACAAACTAAA
AGGTGGAGAGGGTTATTTTGAACCACGCGTAGATATTATTGAAAAAGATGATAAATTTATCTTCGTCGCTGAGTTGCCCG
GAGTCGAAAAAAAGGATATCAATGTCCAACTCCAAAATGGTTTGCTGACCATTGAAGCTAAGATGTATGAAGACAAAGAA
TCTGAAGTAGATAATGTTATCAGAAAAGAGATAAGGAGTGGTTTCTTTAGCCGCAGCATTAATGTAGGACAAAATGTTAA
AGAAGAAGACATAAAAGCCGAATTGGTAAACGGTTTATTGAAGCTCACCGCGCCAAAAATAAAACCAACGGGCAGTGAGG
TTCATAAGATTGCAATCTCATAA

Upstream 100 bases:

>100_bases
TGCTTCTTTAGGCTATGCGCTGTACTTCCAACATCTGTTCTATACTTTAACCGAGAAAATAATTTCTCGGTGTATTAGAA
ATATTTTGTAGGAGGAAATA

Downstream 100 bases:

>100_bases
CAGCTGTTGATACGAATAAAAAAGGGGTTAGGGATTTGTAGGCTTAACCTCTTTTTTAACGCAATCACATTCCAATCTAT
TCACTAGATACATTTTATCC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNNIIPRKQWLSPEHILDDFFALNKLKGGEGYFEPRVDIIEKDDKFIFVAELPGVEKKDINVQLQNGLLTIEAKMYEDKE
SEVDNVIRKEIRSGFFSRSINVGQNVKEEDIKAELVNGLLKLTAPKIKPTGSEVHKIAIS

Sequences:

>Translated_140_residues
MNNIIPRKQWLSPEHILDDFFALNKLKGGEGYFEPRVDIIEKDDKFIFVAELPGVEKKDINVQLQNGLLTIEAKMYEDKE
SEVDNVIRKEIRSGFFSRSINVGQNVKEEDIKAELVNGLLKLTAPKIKPTGSEVHKIAIS
>Mature_140_residues
MNNIIPRKQWLSPEHILDDFFALNKLKGGEGYFEPRVDIIEKDDKFIFVAELPGVEKKDINVQLQNGLLTIEAKMYEDKE
SEVDNVIRKEIRSGFFSRSINVGQNVKEEDIKAELVNGLLKLTAPKIKPTGSEVHKIAIS

Specific function: Probable chaperone [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15924; Mature: 15924

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIIPRKQWLSPEHILDDFFALNKLKGGEGYFEPRVDIIEKDDKFIFVAELPGVEKKDI
CCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
NVQLQNGLLTIEAKMYEDKESEVDNVIRKEIRSGFFSRSINVGQNVKEEDIKAELVNGLL
EEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KLTAPKIKPTGSEVHKIAIS
HHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MNNIIPRKQWLSPEHILDDFFALNKLKGGEGYFEPRVDIIEKDDKFIFVAELPGVEKKDI
CCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
NVQLQNGLLTIEAKMYEDKESEVDNVIRKEIRSGFFSRSINVGQNVKEEDIKAELVNGLL
EEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KLTAPKIKPTGSEVHKIAIS
HHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA