| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945184
Identifier: 119945184
GI number: 119945184
Start: 1781124
End: 1781810
Strand: Direct
Name: 119945184
Synonym: Ping_1448
Alternate gene names: NA
Gene position: 1781124-1781810 (Clockwise)
Preceding gene: 119945182
Following gene: 119945185
Centisome position: 39.06
GC content: 41.19
Gene sequence:
>687_bases ATGATAAATAGAAGGGGTAAAGCCTGGTGGCGCTTATTGAGTGGTTTACTGCTGCTAATAAGTTTGTCCAGCCTGACCCT ATGGTTATTAAATGAGCAGAAAATAATAACCGCGCTTAAAAGTAATTATGGCGTGCGGGCTGCTGACAGGGGAATAGCCT GGTTTGATATTCTGGATTCAGCACAACAGTTGAGCGACATAGAAAAATTAACCAAGGTTAATAGTTTTTTTAATATGCTC TATTTCATTGATGACAAGCAGCTCTGGGGAGAAGACAATTACTGGGCAACCCCGCTGGAATTTATTGGTGTAAAAGGGGG AGACTGTGAGGAGTTTGCCATCGCAAAATACTTTACATTATTAGCACTGGGTATCGACGATCAGAAAATGCGTATTACCA TGGTCAAAGCATTGACGCTGAATCAATATCATATGGTACTTTCCTATTATGAAACGCCCGGTTCAGTGCCTCTGGTGCTC GATAACTTGGATATGCAAATCAAACCTGCCAATCAACGTCAGGATCTTGATCCTATTTATAGCTTTAACGGTAGCCAACT TTGGCTTAATAAAGAAAAAGGACAAGGTGTACTGGTCGGTAAATCAGATCGCCTCGACCGCTGGACAAATTTAATTCAAC GTATGGAATTTTCACGGATGAAACAGCCAAAGTTGAGAATGGAGTAA
Upstream 100 bases:
>100_bases TCGCCGTGTTGTTGCTGAAATAAGCCGTGAAGTACAACAGAAAGAGTTGAAATGAACAATCTATAGCATCGATTCTCCTG CTGAGTGATATTTAGTGCTG
Downstream 100 bases:
>100_bases ATATTCAATGACCCTGTTTAAGCAGATAAACTCATTATTGTTAGGACTTTTTTTGCTGGTAATGTCCACTTTATTTTATT TTCAGTTTACCGAAACAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein; Transglutaminase Domain Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MINRRGKAWWRLLSGLLLLISLSSLTLWLLNEQKIITALKSNYGVRAADRGIAWFDILDSAQQLSDIEKLTKVNSFFNML YFIDDKQLWGEDNYWATPLEFIGVKGGDCEEFAIAKYFTLLALGIDDQKMRITMVKALTLNQYHMVLSYYETPGSVPLVL DNLDMQIKPANQRQDLDPIYSFNGSQLWLNKEKGQGVLVGKSDRLDRWTNLIQRMEFSRMKQPKLRME
Sequences:
>Translated_228_residues MINRRGKAWWRLLSGLLLLISLSSLTLWLLNEQKIITALKSNYGVRAADRGIAWFDILDSAQQLSDIEKLTKVNSFFNML YFIDDKQLWGEDNYWATPLEFIGVKGGDCEEFAIAKYFTLLALGIDDQKMRITMVKALTLNQYHMVLSYYETPGSVPLVL DNLDMQIKPANQRQDLDPIYSFNGSQLWLNKEKGQGVLVGKSDRLDRWTNLIQRMEFSRMKQPKLRME >Mature_228_residues MINRRGKAWWRLLSGLLLLISLSSLTLWLLNEQKIITALKSNYGVRAADRGIAWFDILDSAQQLSDIEKLTKVNSFFNML YFIDDKQLWGEDNYWATPLEFIGVKGGDCEEFAIAKYFTLLALGIDDQKMRITMVKALTLNQYHMVLSYYETPGSVPLVL DNLDMQIKPANQRQDLDPIYSFNGSQLWLNKEKGQGVLVGKSDRLDRWTNLIQRMEFSRMKQPKLRME
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26452; Mature: 26452
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRRGKAWWRLLSGLLLLISLSSLTLWLLNEQKIITALKSNYGVRAADRGIAWFDILDS CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCEECCCCCHHHHHHHH AQQLSDIEKLTKVNSFFNMLYFIDDKQLWGEDNYWATPLEFIGVKGGDCEEFAIAKYFTL HHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCCCEECHHHEEECCCCCHHHHHHHHHHHH LALGIDDQKMRITMVKALTLNQYHMVLSYYETPGSVPLVLDNLDMQIKPANQRQDLDPIY HHCCCCCCCEEEEEEEEHHHCHHEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCHHH SFNGSQLWLNKEKGQGVLVGKSDRLDRWTNLIQRMEFSRMKQPKLRME CCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MINRRGKAWWRLLSGLLLLISLSSLTLWLLNEQKIITALKSNYGVRAADRGIAWFDILDS CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCEECCCCCHHHHHHHH AQQLSDIEKLTKVNSFFNMLYFIDDKQLWGEDNYWATPLEFIGVKGGDCEEFAIAKYFTL HHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCCCEECHHHEEECCCCCHHHHHHHHHHHH LALGIDDQKMRITMVKALTLNQYHMVLSYYETPGSVPLVLDNLDMQIKPANQRQDLDPIY HHCCCCCCCEEEEEEEEHHHCHHEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCHHH SFNGSQLWLNKEKGQGVLVGKSDRLDRWTNLIQRMEFSRMKQPKLRME CCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA