| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945118
Identifier: 119945118
GI number: 119945118
Start: 1698924
End: 1699652
Strand: Direct
Name: 119945118
Synonym: Ping_1379
Alternate gene names: NA
Gene position: 1698924-1699652 (Clockwise)
Preceding gene: 119945117
Following gene: 119945119
Centisome position: 37.26
GC content: 39.92
Gene sequence:
>729_bases ATGAAATCATTATTATTATCAACATCCATTGCAGCAAGCCTGCTCTTCTCATCGGTCGTATTTGCGGAAAAAATTAGCGT TGCGCAACAAAAAAAATTATCTGAAATAACGAGTTTATTGGAACAGAATCCAGAAGTGATTGAAGGATTATATATAAATT TAATCAAGTACGTAGAGGGCCAAGGAACCATCAGTAATACACTAAAACAGCATCATGACTATTTATATAACAACCCAATG CATTCTTATTTTGGCTCAGAGGCCCCTGAACTGACCATCATCAACTTTACCGATTACAACTGCCCCTATTGCAAGCGTTT AGAGTCAGGGCTGGTTGAGATGATTAACAAGTATCCTGAAATTCGAGTCGTTAATATCAACTTACCCTTTCAGCAACCGA TGATCCCTGATTTGGATACCAATACAGCATGGTATGCTTTGAACGTATGGGAAAACAACAGACCCGCCTTTTCTGAAGTA CACCGTTTAATGATGGCTAAACCCTCGAAACATGACAGTGAATCGATTATGAAAATAGCGGAAATGACCGGAACTGAAGC GGCGTTAGCCCCGAATGAAAGGAAAAAGAAGATGGTGGAAAAGAATGAGAGAATCTTCAGCCAATTAGGTTTGCGAGGAA CGCCCGCCTTGATTATTGGCAATGAAATAAGTCCCGGGGCCATACCTCAAGCGCAACTGGATAAATTGATCAAATCACAA TTAAAATAG
Upstream 100 bases:
>100_bases AATTCTCTTAAGGTAACATTATGAAATCATTACTATTATCAACATCAATTGCAATATCTGGCTACGTTTATACTTCTCTT AATTCTCTTAAGGTAACATT
Downstream 100 bases:
>100_bases CATAAAAATCAGCACCCGTAGCTAAAATTAAAGACTATGGGTGTACAGGATTTGTTGCAAATATGCGGGGTGGGTTAATT GCCTATTGCCTGCAAAAAGA
Product: thiol:disulfide interchange protein DsbA
Products: NA
Alternate protein names: Outer Membrane Protein; ThiolDisulfide Interchange Protein DsbA; Suppressor For Copper-Sensitivity C; DsbA Oxidoreductase; Metal Resistance Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; DSBA-Like Thioredoxin Domain Protein; Secreted Protein Suppressor For Copper-Sensitivity C; Dsba Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; Thioredoxin Domain-Containing Protein; Protein-Disulfide Isomerase; Copper-Sensitivity Suppressor C Protein; Copper Sensitivity Protein ScsC; Secreted Copper-Sensitivity Suppressor C
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKSLLLSTSIAASLLFSSVVFAEKISVAQQKKLSEITSLLEQNPEVIEGLYINLIKYVEGQGTISNTLKQHHDYLYNNPM HSYFGSEAPELTIINFTDYNCPYCKRLESGLVEMINKYPEIRVVNINLPFQQPMIPDLDTNTAWYALNVWENNRPAFSEV HRLMMAKPSKHDSESIMKIAEMTGTEAALAPNERKKKMVEKNERIFSQLGLRGTPALIIGNEISPGAIPQAQLDKLIKSQ LK
Sequences:
>Translated_242_residues MKSLLLSTSIAASLLFSSVVFAEKISVAQQKKLSEITSLLEQNPEVIEGLYINLIKYVEGQGTISNTLKQHHDYLYNNPM HSYFGSEAPELTIINFTDYNCPYCKRLESGLVEMINKYPEIRVVNINLPFQQPMIPDLDTNTAWYALNVWENNRPAFSEV HRLMMAKPSKHDSESIMKIAEMTGTEAALAPNERKKKMVEKNERIFSQLGLRGTPALIIGNEISPGAIPQAQLDKLIKSQ LK >Mature_242_residues MKSLLLSTSIAASLLFSSVVFAEKISVAQQKKLSEITSLLEQNPEVIEGLYINLIKYVEGQGTISNTLKQHHDYLYNNPM HSYFGSEAPELTIINFTDYNCPYCKRLESGLVEMINKYPEIRVVNINLPFQQPMIPDLDTNTAWYALNVWENNRPAFSEV HRLMMAKPSKHDSESIMKIAEMTGTEAALAPNERKKKMVEKNERIFSQLGLRGTPALIIGNEISPGAIPQAQLDKLIKSQ LK
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27315; Mature: 27315
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLLSTSIAASLLFSSVVFAEKISVAQQKKLSEITSLLEQNPEVIEGLYINLIKYVEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC QGTISNTLKQHHDYLYNNPMHSYFGSEAPELTIINFTDYNCPYCKRLESGLVEMINKYPE CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC IRVVNINLPFQQPMIPDLDTNTAWYALNVWENNRPAFSEVHRLMMAKPSKHDSESIMKIA EEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH EMTGTEAALAPNERKKKMVEKNERIFSQLGLRGTPALIIGNEISPGAIPQAQLDKLIKSQ HHCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH LK CC >Mature Secondary Structure MKSLLLSTSIAASLLFSSVVFAEKISVAQQKKLSEITSLLEQNPEVIEGLYINLIKYVEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC QGTISNTLKQHHDYLYNNPMHSYFGSEAPELTIINFTDYNCPYCKRLESGLVEMINKYPE CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC IRVVNINLPFQQPMIPDLDTNTAWYALNVWENNRPAFSEVHRLMMAKPSKHDSESIMKIA EEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH EMTGTEAALAPNERKKKMVEKNERIFSQLGLRGTPALIIGNEISPGAIPQAQLDKLIKSQ HHCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA