Click here to switch to the map view.

The map label for this gene is 119945117

Identifier: 119945117

GI number: 119945117

Start: 1698298

End: 1698825

Strand: Direct

Name: 119945117

Synonym: Ping_1378

Alternate gene names: NA

Gene position: 1698298-1698825 (Clockwise)

Preceding gene: 119945116

Following gene: 119945118

Centisome position: 37.25

GC content: 40.34

Gene sequence:

>528_bases
ATGGTAAATAAAGGGATGGAAAAGGATAAACCTAAAACAAAAGTAGTACGGTGGATGAAAGAGATTCTGACATTCACTCT
TATTGTGACGGTTTTGTCGTTAGCTATTGATGCTTGGCGTAGCAGAGAGATGCCATCGACAAATATGCCTTCTCTGTCAA
TGAGTACTTTGGAAGGTGACTGGGTTGATATTAAAAAAATGAGTCAAGATAAACCCATTTTACTCTACTTTTGGGCAACT
TGGTGCTCTGTTTGTAACTTCGTCAGCCCAAGTGTCAATTGGTTATCGGAGAGTCACCAGGTTATTTCTGTGGCTCTCTC
GTCCGGTGATGATAGACGCTTAGGGCAATTTATGGCTTACAAAGAGTACGACTTCCCGGTCATTAATGATCCAAAAGGTA
ACATTGGCCAAACTTGGAATATTACTGTCATCCCATCAATTTTCATCGTCAAAAACGGTGAAATATCTTCAATCACAACC
GGCTTTACAACCCCAATGGGTATGTGGCTACGTTTATACTTCTCTTAA

Upstream 100 bases:

>100_bases
TGGTCTATGGCCCGAATGCCCCACAAGGTTTGCCTTTATCTGTCATATTAAGCAGTGATGAAGTTATGCAGGCACTGGAA
GATGCAGGGAGAGAACAATA

Downstream 100 bases:

>100_bases
TTCTCTTAAGGTAACATTATGAAATCATTACTATTATCAACATCAATTGCAATATCTGGCTACGTTTATACTTCTCTTAA
TTCTCTTAAGGTAACATTAT

Product: thioredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MVNKGMEKDKPKTKVVRWMKEILTFTLIVTVLSLAIDAWRSREMPSTNMPSLSMSTLEGDWVDIKKMSQDKPILLYFWAT
WCSVCNFVSPSVNWLSESHQVISVALSSGDDRRLGQFMAYKEYDFPVINDPKGNIGQTWNITVIPSIFIVKNGEISSITT
GFTTPMGMWLRLYFS

Sequences:

>Translated_175_residues
MVNKGMEKDKPKTKVVRWMKEILTFTLIVTVLSLAIDAWRSREMPSTNMPSLSMSTLEGDWVDIKKMSQDKPILLYFWAT
WCSVCNFVSPSVNWLSESHQVISVALSSGDDRRLGQFMAYKEYDFPVINDPKGNIGQTWNITVIPSIFIVKNGEISSITT
GFTTPMGMWLRLYFS
>Mature_175_residues
MVNKGMEKDKPKTKVVRWMKEILTFTLIVTVLSLAIDAWRSREMPSTNMPSLSMSTLEGDWVDIKKMSQDKPILLYFWAT
WCSVCNFVSPSVNWLSESHQVISVALSSGDDRRLGQFMAYKEYDFPVINDPKGNIGQTWNITVIPSIFIVKNGEISSITT
GFTTPMGMWLRLYFS

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 19988; Mature: 19988

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKGMEKDKPKTKVVRWMKEILTFTLIVTVLSLAIDAWRSREMPSTNMPSLSMSTLEGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
WVDIKKMSQDKPILLYFWATWCSVCNFVSPSVNWLSESHQVISVALSSGDDRRLGQFMAY
CHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHCCHHEEEEEECCCCCHHHHHHHHH
KEYDFPVINDPKGNIGQTWNITVIPSIFIVKNGEISSITTGFTTPMGMWLRLYFS
HCCCCCEECCCCCCCCCEEEEEEECEEEEEECCCCCEEECCCCCHHHHHEEEECC
>Mature Secondary Structure
MVNKGMEKDKPKTKVVRWMKEILTFTLIVTVLSLAIDAWRSREMPSTNMPSLSMSTLEGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
WVDIKKMSQDKPILLYFWATWCSVCNFVSPSVNWLSESHQVISVALSSGDDRRLGQFMAY
CHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHCCHHEEEEEECCCCCHHHHHHHHH
KEYDFPVINDPKGNIGQTWNITVIPSIFIVKNGEISSITTGFTTPMGMWLRLYFS
HCCCCCEECCCCCCCCCEEEEEEECEEEEEECCCCCEEECCCCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]