| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945061
Identifier: 119945061
GI number: 119945061
Start: 1637596
End: 1638183
Strand: Direct
Name: 119945061
Synonym: Ping_1317
Alternate gene names: NA
Gene position: 1637596-1638183 (Clockwise)
Preceding gene: 119945060
Following gene: 119945062
Centisome position: 35.92
GC content: 40.65
Gene sequence:
>588_bases ATGAATAAACAAACCTCCCCTTATCAAGCTTTAGTCGCGCTCTGTGAAATAGCAGAAATCAAAAAAAATGCGCTGGATGT TGATCAAATGTTAGGGTTTATCTGCGCCATTAGTGCGTCTCCCACACAACTTGATCTTCAGGACTGGTTGCCCTGTTTAT GGGCTGAAGGTCTAATGCCTTCTTTTAGCAATGAGCAGTTAGCGGTTGAATTTGCGACTGCATGCATGCAGTTTTACGAT GCTTGTTTGACTGGCTACCAACAATCGATAGCGCTTGTGTTACCGACACAGAGATGGATAAATGAATCCCTAGAAATTAC CGAGCAGGGCAGCCGTTTTGCATCAGGTTATTTATCGGGTTTTCAAAGTATTGAGCAGAATATTGAGATAGTGAAAGAAG GGACACTTGAGCAGTTATTACAAACTGCAACATTACTATTAAGTAAAATAACGAATCCCAGTGGCGATAATCTGGAGATG TTGACTCTTTTTAATCAACTACCTGAAGTAGATGAAATAGTGTCTTCATTACCCCTGCTATTAGGTACACTGGGGCATTT TTCTTTGCAGGCAAATTATCATGACTAA
Upstream 100 bases:
>100_bases GGCTCGGTGCTAACGCTGTAATCCTTAAAATTACAATACGTTAAGTATAGACAGTAACACTGGCAACCGCTTATTTAGAC ATGGAATTTTTTAGGTGAAA
Downstream 100 bases:
>100_bases TAGTGTAGATGAGGTTTTTTTTAACTATAAAAATTATTTTTCAGTGGTGCATGAAAATAATGAATTTATTGTCATCAATA AGCAGGCCGGTATTAATTTT
Product: yecA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNKQTSPYQALVALCEIAEIKKNALDVDQMLGFICAISASPTQLDLQDWLPCLWAEGLMPSFSNEQLAVEFATACMQFYD ACLTGYQQSIALVLPTQRWINESLEITEQGSRFASGYLSGFQSIEQNIEIVKEGTLEQLLQTATLLLSKITNPSGDNLEM LTLFNQLPEVDEIVSSLPLLLGTLGHFSLQANYHD
Sequences:
>Translated_195_residues MNKQTSPYQALVALCEIAEIKKNALDVDQMLGFICAISASPTQLDLQDWLPCLWAEGLMPSFSNEQLAVEFATACMQFYD ACLTGYQQSIALVLPTQRWINESLEITEQGSRFASGYLSGFQSIEQNIEIVKEGTLEQLLQTATLLLSKITNPSGDNLEM LTLFNQLPEVDEIVSSLPLLLGTLGHFSLQANYHD >Mature_195_residues MNKQTSPYQALVALCEIAEIKKNALDVDQMLGFICAISASPTQLDLQDWLPCLWAEGLMPSFSNEQLAVEFATACMQFYD ACLTGYQQSIALVLPTQRWINESLEITEQGSRFASGYLSGFQSIEQNIEIVKEGTLEQLLQTATLLLSKITNPSGDNLEM LTLFNQLPEVDEIVSSLPLLLGTLGHFSLQANYHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21612; Mature: 21612
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQTSPYQALVALCEIAEIKKNALDVDQMLGFICAISASPTQLDLQDWLPCLWAEGLMP CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCC SFSNEQLAVEFATACMQFYDACLTGYQQSIALVLPTQRWINESLEITEQGSRFASGYLSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH FQSIEQNIEIVKEGTLEQLLQTATLLLSKITNPSGDNLEMLTLFNQLPEVDEIVSSLPLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH LGTLGHFSLQANYHD HHHHHHHEEECCCCC >Mature Secondary Structure MNKQTSPYQALVALCEIAEIKKNALDVDQMLGFICAISASPTQLDLQDWLPCLWAEGLMP CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCC SFSNEQLAVEFATACMQFYDACLTGYQQSIALVLPTQRWINESLEITEQGSRFASGYLSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH FQSIEQNIEIVKEGTLEQLLQTATLLLSKITNPSGDNLEMLTLFNQLPEVDEIVSSLPLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH LGTLGHFSLQANYHD HHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA