| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pfkA [H]
Identifier: 119945060
GI number: 119945060
Start: 1636478
End: 1637440
Strand: Direct
Name: pfkA [H]
Synonym: Ping_1316
Alternate gene names: 119945060
Gene position: 1636478-1637440 (Clockwise)
Preceding gene: 119945059
Following gene: 119945061
Centisome position: 35.89
GC content: 42.06
Gene sequence:
>963_bases ATGATTAAAAAAATTGGTGTTTTAACAAGCGGCGGTGATGCACCGGGTATGAATTCAGCAATACGTGCAGTCGTGCGCTG TGCTCTGGCAAATGATATTGAAGTCTATGGTATTTATGATGGTTATGCCGGACTTCATAAAGGTAATCTCAAACAGTTAA CGCGTCATTCTGTTTCGGATATGATTAACCGTGGTGGTACTTTCTTGGGCAGTGCCCGTTTTCCTGAATTTAAAGAAGAA AGTGTCCGTCAGGAAGCGATTAAAAATCTAGAAAAGCACGGTATTGAAGCATTAGTTGTGATCGGTGGTGATGGTTCTTA TATGGGGGCGAAAAAACTCAGTGAAATGGGTTATCCCTGTATCGGTATTCCTGGAACAATTGATAATGATATTGCCGGAA CAGATTATACTATCGGATTTATGACCTGCTTAAATACCATTGTTGATGCGGTAGACCGTTTACGTGATACCTCTTCATCA CATAACCGTATCTCTATTGTTGAAGTAATGGGTCGCTATTGTGGTGATTTAACGCTTTGGTCTGCCATTGCTGGCGGCAG TGAATATGTTGTCCTGCCGGAAATAGGTTTTGACGAAGCTGAATTATTTGAGCATATTGAAACGGGTGAAGCCTCGGGTA AAAAGCATGCCATTATTATGATCACTGAACATGTAACGGATGTGACAGAATTGGCTAAACGTATTGAAGCAAAGACCGGC CGAGAAACGCGTGCCACTATTTTAGGCCATATCCAACGTGGTGGTTCACCTATGGCGTTTGATCGCGTATTAGCAAGTCG TATGGGTGCCCGTGCAGTTGAGCTTTTGATTGATGGTAAAAGTGCGCGTTGTATCGGTCTTCAGTATGGCAAGATGGTTG ACCATGATATTATTGAATGTTTAGAAGAGATGGAGCGTCCGTTCCGTGAAGATTTATACAATTTATCGAACGTGTTATTC TAA
Upstream 100 bases:
>100_bases AATTTTAAGGTAGGCAGATATAAGTTCAGGATATCCCTTCCGAATCACATATTTCGAATATTGACTTAGCAGTTACAGCA GTAACAGGATGAGGTAGCAA
Downstream 100 bases:
>100_bases TAATAAGCCGATTAATTTAAATGATCTAAGCCTACCTTATGGTAGGCTTTTTTTTGGCTCGGTGCTAACGCTGTAATCCT TAAAATTACAATACGTTAAG
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIKKIGVLTSGGDAPGMNSAIRAVVRCALANDIEVYGIYDGYAGLHKGNLKQLTRHSVSDMINRGGTFLGSARFPEFKEE SVRQEAIKNLEKHGIEALVVIGGDGSYMGAKKLSEMGYPCIGIPGTIDNDIAGTDYTIGFMTCLNTIVDAVDRLRDTSSS HNRISIVEVMGRYCGDLTLWSAIAGGSEYVVLPEIGFDEAELFEHIETGEASGKKHAIIMITEHVTDVTELAKRIEAKTG RETRATILGHIQRGGSPMAFDRVLASRMGARAVELLIDGKSARCIGLQYGKMVDHDIIECLEEMERPFREDLYNLSNVLF
Sequences:
>Translated_320_residues MIKKIGVLTSGGDAPGMNSAIRAVVRCALANDIEVYGIYDGYAGLHKGNLKQLTRHSVSDMINRGGTFLGSARFPEFKEE SVRQEAIKNLEKHGIEALVVIGGDGSYMGAKKLSEMGYPCIGIPGTIDNDIAGTDYTIGFMTCLNTIVDAVDRLRDTSSS HNRISIVEVMGRYCGDLTLWSAIAGGSEYVVLPEIGFDEAELFEHIETGEASGKKHAIIMITEHVTDVTELAKRIEAKTG RETRATILGHIQRGGSPMAFDRVLASRMGARAVELLIDGKSARCIGLQYGKMVDHDIIECLEEMERPFREDLYNLSNVLF >Mature_320_residues MIKKIGVLTSGGDAPGMNSAIRAVVRCALANDIEVYGIYDGYAGLHKGNLKQLTRHSVSDMINRGGTFLGSARFPEFKEE SVRQEAIKNLEKHGIEALVVIGGDGSYMGAKKLSEMGYPCIGIPGTIDNDIAGTDYTIGFMTCLNTIVDAVDRLRDTSSS HNRISIVEVMGRYCGDLTLWSAIAGGSEYVVLPEIGFDEAELFEHIETGEASGKKHAIIMITEHVTDVTELAKRIEAKTG RETRATILGHIQRGGSPMAFDRVLASRMGARAVELLIDGKSARCIGLQYGKMVDHDIIECLEEMERPFREDLYNLSNVLF
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI11321601, Length=339, Percent_Identity=39.5280235988201, Blast_Score=209, Evalue=2e-54, Organism=Homo sapiens, GI266453619, Length=338, Percent_Identity=38.4615384615385, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI266453768, Length=338, Percent_Identity=38.4615384615385, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI266453748, Length=338, Percent_Identity=38.4615384615385, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI4505749, Length=338, Percent_Identity=38.4615384615385, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI48762920, Length=338, Percent_Identity=39.0532544378698, Blast_Score=207, Evalue=1e-53, Organism=Escherichia coli, GI1790350, Length=320, Percent_Identity=67.8125, Blast_Score=454, Evalue=1e-129, Organism=Caenorhabditis elegans, GI25147584, Length=341, Percent_Identity=36.3636363636364, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17558788, Length=312, Percent_Identity=37.8205128205128, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI72003601, Length=289, Percent_Identity=32.5259515570934, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321679, Length=339, Percent_Identity=36.5781710914454, Blast_Score=198, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6323861, Length=341, Percent_Identity=33.7243401759531, Blast_Score=177, Evalue=2e-45, Organism=Drosophila melanogaster, GI28573326, Length=342, Percent_Identity=36.2573099415205, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24652337, Length=341, Percent_Identity=36.3636363636364, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17647809, Length=341, Percent_Identity=36.3636363636364, Blast_Score=198, Evalue=4e-51,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 34922; Mature: 34922
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIGVLTSGGDAPGMNSAIRAVVRCALANDIEVYGIYDGYAGLHKGNLKQLTRHSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH MINRGGTFLGSARFPEFKEESVRQEAIKNLEKHGIEALVVIGGDGSYMGAKKLSEMGYPC HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCE IGIPGTIDNDIAGTDYTIGFMTCLNTIVDAVDRLRDTSSSHNRISIVEVMGRYCGDLTLW ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCHHHHH SAIAGGSEYVVLPEIGFDEAELFEHIETGEASGKKHAIIMITEHVTDVTELAKRIEAKTG HHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC RETRATILGHIQRGGSPMAFDRVLASRMGARAVELLIDGKSARCIGLQYGKMVDHDIIEC CHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEEECCCCEEEEEHHCCHHHHHHHHH LEEMERPFREDLYNLSNVLF HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKKIGVLTSGGDAPGMNSAIRAVVRCALANDIEVYGIYDGYAGLHKGNLKQLTRHSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH MINRGGTFLGSARFPEFKEESVRQEAIKNLEKHGIEALVVIGGDGSYMGAKKLSEMGYPC HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCE IGIPGTIDNDIAGTDYTIGFMTCLNTIVDAVDRLRDTSSSHNRISIVEVMGRYCGDLTLW ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCHHHHH SAIAGGSEYVVLPEIGFDEAELFEHIETGEASGKKHAIIMITEHVTDVTELAKRIEAKTG HHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC RETRATILGHIQRGGSPMAFDRVLASRMGARAVELLIDGKSARCIGLQYGKMVDHDIIEC CHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEEECCCCEEEEEHHCCHHHHHHHHH LEEMERPFREDLYNLSNVLF HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA