| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945019
Identifier: 119945019
GI number: 119945019
Start: 1578343
End: 1578951
Strand: Direct
Name: 119945019
Synonym: Ping_1271
Alternate gene names: NA
Gene position: 1578343-1578951 (Clockwise)
Preceding gene: 119945018
Following gene: 119945020
Centisome position: 34.62
GC content: 35.3
Gene sequence:
>609_bases ATGAAAATAGCACTGTTTGATTTTGACGAAACATTAATTGAAGAAAATTCATTAAATTTCTTATTTAAATATTTTTTAGG TAATACACCATTAGCTATACAATTATTACCCTTGTTGTTTAAAGCTTCCACTTATCAGCAGGGGATTAAGGTATCAATAA AAACGTATTTATACAAAAAATCGTTAAAAGGAAAAACACGGGAGGAGCTTTTTACGGCTGGTGTAGCGTTATTTGATAAA GTCACTCCAATTATTGAAGTGGTTGATCTTATGATAAAATTAGATGATGCCGGCATTGAAATATGGATTGTGACTGCATC ACCAGAGTCTTATATAGCCGGTATTGTGCAGCAGCTAGGCTGGCCCGTTAAACGAGTGATCGGTACTACTATAATAGAGC AGAATGGCATACTAACGGGTGAAATTGAAAGTGAATGCCAAGAGCAAGAAAAAGTTGTTCGATTAAACAGCATTTTTAGG GGCAATGACGAGCGTTACGACATTGTTCAGGCATTTGGTAATTTACCGGTCGATATTCCCATGTTAAAAATGGCTAATAA TAGCTTTTACGTGTTAAACGAGGTTGTGAAACCATTTAATGTGGAGTAG
Upstream 100 bases:
>100_bases AAAAATATTGATGTTGTTGAAATGAATGATATGCCATTTGGTGCATGTGCATTAATTAAAGACGTTAAATAAGTTTTACG CCCGCAAAAAGAAGATAAAA
Downstream 100 bases:
>100_bases GTTACTGATACGGTTATCATTATCTGAATGATAACTTCAGATGTATTTTTTTTGCAGGGAAGCCTTTCATTTATTTGAAT ATAACAGCTGCAGAATCAAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKIALFDFDETLIEENSLNFLFKYFLGNTPLAIQLLPLLFKASTYQQGIKVSIKTYLYKKSLKGKTREELFTAGVALFDK VTPIIEVVDLMIKLDDAGIEIWIVTASPESYIAGIVQQLGWPVKRVIGTTIIEQNGILTGEIESECQEQEKVVRLNSIFR GNDERYDIVQAFGNLPVDIPMLKMANNSFYVLNEVVKPFNVE
Sequences:
>Translated_202_residues MKIALFDFDETLIEENSLNFLFKYFLGNTPLAIQLLPLLFKASTYQQGIKVSIKTYLYKKSLKGKTREELFTAGVALFDK VTPIIEVVDLMIKLDDAGIEIWIVTASPESYIAGIVQQLGWPVKRVIGTTIIEQNGILTGEIESECQEQEKVVRLNSIFR GNDERYDIVQAFGNLPVDIPMLKMANNSFYVLNEVVKPFNVE >Mature_202_residues MKIALFDFDETLIEENSLNFLFKYFLGNTPLAIQLLPLLFKASTYQQGIKVSIKTYLYKKSLKGKTREELFTAGVALFDK VTPIIEVVDLMIKLDDAGIEIWIVTASPESYIAGIVQQLGWPVKRVIGTTIIEQNGILTGEIESECQEQEKVVRLNSIFR GNDERYDIVQAFGNLPVDIPMLKMANNSFYVLNEVVKPFNVE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22889; Mature: 22889
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALFDFDETLIEENSLNFLFKYFLGNTPLAIQLLPLLFKASTYQQGIKVSIKTYLYKK CEEEEEECHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHH SLKGKTREELFTAGVALFDKVTPIIEVVDLMIKLDDAGIEIWIVTASPESYIAGIVQQLG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCHHHHHHHHHHHC WPVKRVIGTTIIEQNGILTGEIESECQEQEKVVRLNSIFRGNDERYDIVQAFGNLPVDIP CHHHHHHHHHHEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCH MLKMANNSFYVLNEVVKPFNVE HEEECCCCEEEHHHHCCCCCCC >Mature Secondary Structure MKIALFDFDETLIEENSLNFLFKYFLGNTPLAIQLLPLLFKASTYQQGIKVSIKTYLYKK CEEEEEECHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHH SLKGKTREELFTAGVALFDKVTPIIEVVDLMIKLDDAGIEIWIVTASPESYIAGIVQQLG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCHHHHHHHHHHHC WPVKRVIGTTIIEQNGILTGEIESECQEQEKVVRLNSIFRGNDERYDIVQAFGNLPVDIP CHHHHHHHHHHEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCH MLKMANNSFYVLNEVVKPFNVE HEEECCCCEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA