| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945018
Identifier: 119945018
GI number: 119945018
Start: 1577205
End: 1578314
Strand: Direct
Name: 119945018
Synonym: Ping_1270
Alternate gene names: NA
Gene position: 1577205-1578314 (Clockwise)
Preceding gene: 119945017
Following gene: 119945019
Centisome position: 34.59
GC content: 36.49
Gene sequence:
>1110_bases ATGTTTAATAATTTATACTCCGATAAAATCCCTTTATTGGGCAGCTACTGCGCAGAAGATTGTTTATTTCTGTTAAAAAA CATCAAACCTAAATTTTATACTATTGAAGACAAAGAACGGTTAATTCAAACTGGTGTAATGCATTACTCAGAAATGGTGA ATCAAGAAAGCGCACCATCGAAAGAGTATTTAGATCTTTTTTTAAGCCTGACTAAGCAATACAAAAAACGCCTGGCGGTT GAAGTCTTACAATTAGCCAAAAAGATAGTTGAAAATCGTGATGGTGATATCTGTATTCTTTCTTTGGTACGTGCAGGCAC CCCCATTGGCGTGTTATTAAATCGAGCAATTAATGAATATGCCGGGGTCAATTCACAGCATTATTCAATTAGTATTATTC GGGATAAAGGCATTGATGAAAATGCACTGGATCACCTTATTTTTAATCAAAAAATAAAACCCGAAAGCATTGTTTTTGTG GACGGTTGGACTGCAAAAGGGGTGATGACGGAAGAATTAAAAAAAGCGGTTCAGCATTATAATACGCGCCGCAACCTCAA CCTATCTGAACAATTATTTGTTATTTCAGATATCGGCGGAACAGCAGACTTTTCGGCTACCTTTGATGATTATGCGATAC CCAGTGCGCTAATGAATTCGACCGTGAGCGGGCTAATCAGCCGGTCAGTCTTGAATGATCAAATAAATGCGGATGATTTT CATGGCTGTATTTCATATTCTCATTTAGAAAATGATGATCGTTCAAACTGGTTTGTTAATCAGATTTCGGATTGTTTTAA GTTAAGCGATTTTCAAAACCCATCACAAAATAAATCACTTTTGGCAACAACTCGGCAGTCAATGACGCGATTTTTTTTGA AAGAAATGATGCAGCAGCATCATGTTTCTAATAAAAACAGGATTAAGCCTGGTATTGCAGAAGCGACAAGAGTCATGCTT CGCAGGGTGCCTGATTTATTAATTGTGCAGGATAAACTTAGCCCGAGTACAGTCCATTTATTAAAACTGGCAAAAGAGAA AAATATTGATGTTGTTGAAATGAATGATATGCCATTTGGTGCATGTGCATTAATTAAAGACGTTAAATAA
Upstream 100 bases:
>100_bases GTTTTCGGGATCGGTGATAGTGTGTCTGATCTCCCCTTTATTCGAAATTTAGATTTTGCTATCTTTCCTAAATCCAGCCA AATAATGAAAGCTATCTCCC
Downstream 100 bases:
>100_bases GTTTTACGCCCGCAAAAAGAAGATAAAAATGAAAATAGCACTGTTTGATTTTGACGAAACATTAATTGAAGAAAATTCAT TAAATTTCTTATTTAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MFNNLYSDKIPLLGSYCAEDCLFLLKNIKPKFYTIEDKERLIQTGVMHYSEMVNQESAPSKEYLDLFLSLTKQYKKRLAV EVLQLAKKIVENRDGDICILSLVRAGTPIGVLLNRAINEYAGVNSQHYSISIIRDKGIDENALDHLIFNQKIKPESIVFV DGWTAKGVMTEELKKAVQHYNTRRNLNLSEQLFVISDIGGTADFSATFDDYAIPSALMNSTVSGLISRSVLNDQINADDF HGCISYSHLENDDRSNWFVNQISDCFKLSDFQNPSQNKSLLATTRQSMTRFFLKEMMQQHHVSNKNRIKPGIAEATRVML RRVPDLLIVQDKLSPSTVHLLKLAKEKNIDVVEMNDMPFGACALIKDVK
Sequences:
>Translated_369_residues MFNNLYSDKIPLLGSYCAEDCLFLLKNIKPKFYTIEDKERLIQTGVMHYSEMVNQESAPSKEYLDLFLSLTKQYKKRLAV EVLQLAKKIVENRDGDICILSLVRAGTPIGVLLNRAINEYAGVNSQHYSISIIRDKGIDENALDHLIFNQKIKPESIVFV DGWTAKGVMTEELKKAVQHYNTRRNLNLSEQLFVISDIGGTADFSATFDDYAIPSALMNSTVSGLISRSVLNDQINADDF HGCISYSHLENDDRSNWFVNQISDCFKLSDFQNPSQNKSLLATTRQSMTRFFLKEMMQQHHVSNKNRIKPGIAEATRVML RRVPDLLIVQDKLSPSTVHLLKLAKEKNIDVVEMNDMPFGACALIKDVK >Mature_369_residues MFNNLYSDKIPLLGSYCAEDCLFLLKNIKPKFYTIEDKERLIQTGVMHYSEMVNQESAPSKEYLDLFLSLTKQYKKRLAV EVLQLAKKIVENRDGDICILSLVRAGTPIGVLLNRAINEYAGVNSQHYSISIIRDKGIDENALDHLIFNQKIKPESIVFV DGWTAKGVMTEELKKAVQHYNTRRNLNLSEQLFVISDIGGTADFSATFDDYAIPSALMNSTVSGLISRSVLNDQINADDF HGCISYSHLENDDRSNWFVNQISDCFKLSDFQNPSQNKSLLATTRQSMTRFFLKEMMQQHHVSNKNRIKPGIAEATRVML RRVPDLLIVQDKLSPSTVHLLKLAKEKNIDVVEMNDMPFGACALIKDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41893; Mature: 41893
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNLYSDKIPLLGSYCAEDCLFLLKNIKPKFYTIEDKERLIQTGVMHYSEMVNQESAPS CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCH KEYLDLFLSLTKQYKKRLAVEVLQLAKKIVENRDGDICILSLVRAGTPIGVLLNRAINEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHH AGVNSQHYSISIIRDKGIDENALDHLIFNQKIKPESIVFVDGWTAKGVMTEELKKAVQHY HCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH NTRRNLNLSEQLFVISDIGGTADFSATFDDYAIPSALMNSTVSGLISRSVLNDQINADDF CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH HGCISYSHLENDDRSNWFVNQISDCFKLSDFQNPSQNKSLLATTRQSMTRFFLKEMMQQH HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HVSNKNRIKPGIAEATRVMLRRVPDLLIVQDKLSPSTVHLLKLAKEKNIDVVEMNDMPFG CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCH ACALIKDVK HHHHHHCCC >Mature Secondary Structure MFNNLYSDKIPLLGSYCAEDCLFLLKNIKPKFYTIEDKERLIQTGVMHYSEMVNQESAPS CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCH KEYLDLFLSLTKQYKKRLAVEVLQLAKKIVENRDGDICILSLVRAGTPIGVLLNRAINEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHH AGVNSQHYSISIIRDKGIDENALDHLIFNQKIKPESIVFVDGWTAKGVMTEELKKAVQHY HCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH NTRRNLNLSEQLFVISDIGGTADFSATFDDYAIPSALMNSTVSGLISRSVLNDQINADDF CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH HGCISYSHLENDDRSNWFVNQISDCFKLSDFQNPSQNKSLLATTRQSMTRFFLKEMMQQH HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HVSNKNRIKPGIAEATRVMLRRVPDLLIVQDKLSPSTVHLLKLAKEKNIDVVEMNDMPFG CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCH ACALIKDVK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA