| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945011
Identifier: 119945011
GI number: 119945011
Start: 1570478
End: 1571020
Strand: Direct
Name: 119945011
Synonym: Ping_1263
Alternate gene names: NA
Gene position: 1570478-1571020 (Clockwise)
Preceding gene: 119945010
Following gene: 119945012
Centisome position: 34.44
GC content: 43.83
Gene sequence:
>543_bases ATGACTACGCCAATACCGCGACTATTAATATGCATCCCGATTATTCATACGCAATCAGATATGGGATCGTTAAAGCAAGC AGAGGAAGACCAGCCCGCCGTCACACAACTTTGGCAGGAGATTGAAGAGAAAATTCTAGGTTTTGAGCTTCCCTTTAACA AAGTGCGTTTGTATCAAGATGGCCTGCCCGTATCGGATTTGGCCACTCAAATCGTTAAGGAAACAGCTGCTCAAGGTAGC CATAACCATAAACTCCTTATGCTCCTTATTGAAAAAGGCGCCACGCTGATGGGAACAGAGGATCCCTCTTTGCTTTTAGA AGAGTATCATTTTGATAAGCAATTGGTTAAGCAAGAAATAAGTAAGGAAGATGCCTCAACTATCAAACTGGCCCAATCCC TACTCGAGAGGCGGGATCGTTTTATTGCTGAGCGTGTTAACGCTACACTGAGCTTTGGTGAGATTGGTATATTGTTTTTA GGTGCCCTCCATCAGCCAAATAAATGGTTAGAGAAGGATATTCGGATTATCCAGTGCGGCTAG
Upstream 100 bases:
>100_bases TTTAACTATGCAGCTGATAACTCAATAAAATATATATGAGTTGGAACCTTTTAGAAAGAATCGTTGCTAGAAGCTTATGT GCAAATATTTAAGGAAAGTG
Downstream 100 bases:
>100_bases ATAAATCGGTAGAAGATTAAAAGTTAATTTTCTTACTTTGGTAAGGTTAGTGAATCTAAAACTGGATCCATAGGTTTTGC ATCGTAAGGTATTGCCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTTPIPRLLICIPIIHTQSDMGSLKQAEEDQPAVTQLWQEIEEKILGFELPFNKVRLYQDGLPVSDLATQIVKETAAQGS HNHKLLMLLIEKGATLMGTEDPSLLLEEYHFDKQLVKQEISKEDASTIKLAQSLLERRDRFIAERVNATLSFGEIGILFL GALHQPNKWLEKDIRIIQCG
Sequences:
>Translated_180_residues MTTPIPRLLICIPIIHTQSDMGSLKQAEEDQPAVTQLWQEIEEKILGFELPFNKVRLYQDGLPVSDLATQIVKETAAQGS HNHKLLMLLIEKGATLMGTEDPSLLLEEYHFDKQLVKQEISKEDASTIKLAQSLLERRDRFIAERVNATLSFGEIGILFL GALHQPNKWLEKDIRIIQCG >Mature_179_residues TTPIPRLLICIPIIHTQSDMGSLKQAEEDQPAVTQLWQEIEEKILGFELPFNKVRLYQDGLPVSDLATQIVKETAAQGSH NHKLLMLLIEKGATLMGTEDPSLLLEEYHFDKQLVKQEISKEDASTIKLAQSLLERRDRFIAERVNATLSFGEIGILFLG ALHQPNKWLEKDIRIIQCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20386; Mature: 20255
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIPRLLICIPIIHTQSDMGSLKQAEEDQPAVTQLWQEIEEKILGFELPFNKVRLYQD CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCC GLPVSDLATQIVKETAAQGSHNHKLLMLLIEKGATLMGTEDPSLLLEEYHFDKQLVKQEI CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHH SKEDASTIKLAQSLLERRDRFIAERVNATLSFGEIGILFLGALHQPNKWLEKDIRIIQCG HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHCCCHHHHHHCCEEEECC >Mature Secondary Structure TTPIPRLLICIPIIHTQSDMGSLKQAEEDQPAVTQLWQEIEEKILGFELPFNKVRLYQD CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCC GLPVSDLATQIVKETAAQGSHNHKLLMLLIEKGATLMGTEDPSLLLEEYHFDKQLVKQEI CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHH SKEDASTIKLAQSLLERRDRFIAERVNATLSFGEIGILFLGALHQPNKWLEKDIRIIQCG HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHCCCHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA