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The map label for this gene is gvpJ1 [H]

Identifier: 119945010

GI number: 119945010

Start: 1569529

End: 1569834

Strand: Direct

Name: gvpJ1 [H]

Synonym: Ping_1262

Alternate gene names: 119945010

Gene position: 1569529-1569834 (Clockwise)

Preceding gene: 119945009

Following gene: 119945011

Centisome position: 34.42

GC content: 43.46

Gene sequence:

>306_bases
ATGGCAACAGGAAAACCGCAGTCGATGACTCATTCGGTGAAAAGTACCACCGTAGCGGATCTATTAGAACGTATTCTGGA
CAAGGGAATAGTGGTAACTGGTGATATTAAAATCAAACTGGTTGATGTAGAACTCCTTACTGTGGAGTTGCGTCTAGTGA
TCTGCTCGGTGGATAAAGCGGTAGAGATGGGAATGGACTGGTGGAACAACAATCCTGCTTTCGCTCCTCAAGCTCCTGCG
CAAGAAGGTGAGTTATCCAGCATTGAAAAACGGTTAGAAAAAATAGAGAAAGCATTAGTTAAATGA

Upstream 100 bases:

>100_bases
GAAGAGATTGATAGGCTACGAAAGGAATTTGGCCTTGAAGTTGAAGATCTTAATTTAGATTTGGGCCCATTGGGCCGTTT
ACTGTAAGGAATATATAGGT

Downstream 100 bases:

>100_bases
TATGAGGAAAGCGAATGTCGAAGAGTGTGAGATGGACTGTTTCACAAACTGGCATTGTTAAGTACGGGGGATAATCACAA
AAATTATAAATAACCCTTGT

Product: gas vesicle protein GVPa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MATGKPQSMTHSVKSTTVADLLERILDKGIVVTGDIKIKLVDVELLTVELRLVICSVDKAVEMGMDWWNNNPAFAPQAPA
QEGELSSIEKRLEKIEKALVK

Sequences:

>Translated_101_residues
MATGKPQSMTHSVKSTTVADLLERILDKGIVVTGDIKIKLVDVELLTVELRLVICSVDKAVEMGMDWWNNNPAFAPQAPA
QEGELSSIEKRLEKIEKALVK
>Mature_100_residues
ATGKPQSMTHSVKSTTVADLLERILDKGIVVTGDIKIKLVDVELLTVELRLVICSVDKAVEMGMDWWNNNPAFAPQAPAQ
EGELSSIEKRLEKIEKALVK

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 11131; Mature: 11000

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGKPQSMTHSVKSTTVADLLERILDKGIVVTGDIKIKLVDVELLTVELRLVICSVDKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEHEEEHEEHHHHHHHHHHH
VEMGMDWWNNNPAFAPQAPAQEGELSSIEKRLEKIEKALVK
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATGKPQSMTHSVKSTTVADLLERILDKGIVVTGDIKIKLVDVELLTVELRLVICSVDKA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEHEEEHEEHHHHHHHHHHH
VEMGMDWWNNNPAFAPQAPAQEGELSSIEKRLEKIEKALVK
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]