| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hflB [C]
Identifier: 119944996
GI number: 119944996
Start: 1556826
End: 1559024
Strand: Direct
Name: hflB [C]
Synonym: Ping_1247
Alternate gene names: 119944996
Gene position: 1556826-1559024 (Clockwise)
Preceding gene: 119944995
Following gene: 119944997
Centisome position: 34.14
GC content: 48.48
Gene sequence:
>2199_bases ATGAATGAAAAAAGCACATCACCCCTTATGCTTCAAGTTGCAGAGGCGCTAAGTAAGGATGTTGGCCGTACTTATGCCCG TATTGGACCAGAAGACATGTTACGTTTAGGGCTTGAAGTCGGCGATATAGTGACGGTGAATGGAAAACGGCGCACAGTGG CCAAAGTGATGATTTGTTACAAACCGATGCGCGAGCAGTCTTGCATTCAGTTAGATGGTATTAGCCGAAGTAATGCTGGT GTAGGCCTTGGCGATCGTGTTGAGGTCGAACGGATTATCGCTTCCCCCGCTCAGCGCTTGACACTCACTCCGGTCGATCT CGCTCCCCGAAAAAAAGATCTTAACTACATAGGTAGTCTGGTTGATGGCCTGGTTGTTATGGAAGGAGATCGTATTCGAG TTTCCCTTTTTGGCAGCCGCTCAATCGATTTTAGAGTGAAAAATGTCAGTCCAAAATCTCCAGTCTTGATCGGCGGTACC ACACAGTTAACGATTGGTGATGAAGCTGAAGAGGAGACGTCGTCATCCTCGCTATCTTATGAAGATGTGGGTGGGGTTAA ACCTCAACTGGCGCGAATACGAGAGATGATCGAACTGCCACTGCGCTATCCTGAATTATTTGATCAATTGGGTATCGACG CCCCTAAAGGTGTCCTCATTTATGGGCCACCGGGCTGTGGGAAGACCCTTATTGCTCGGATCATAGCCCATGAAACCGAA GCGAACTTTTTTTCGGTGAGTGGCCCTGAAATTATTCATAAATTCTATGGTGAAAGCGAAGCGCACTTGAGAAAAATTTT CGAAGAGGCGGGGCGTAAGGGACCCAGTATTATCTTTATAGATGAAATTGATGCCATCGCACCACGTCGAGACCAAGTTG TCGGTGAGGTGGAAAAGCGGGTAGTGGCACAATTACTGGCACTGATGGATGGCCTAAACAGTCGCCAGAACATTATCGTC ATTGCCGCCACTAATCTTCCCAATCTTCTGGATCCGGCGCTTCGTCGGCCCGGACGTTTTGATCGTGAAATCTGTATTCC CATCCCAGATCGTGATGGTCGATTACAAATTCTTGAGATCCACACTCGTGGTATGCCCTTGGCCGATGATGTGAAAATGA ACCATCTTGCCGATGTGACCCATGGTTTTGTTGGTGCTGATCTTGAAGCGCTTTGTCGTGAAGCTGCGATGTCGGTCTTA CGGGAAATTCTCCCAAGTATCAATTTATCCCTTGCCAGTATCCCTTGCGAGCAGCTGGCAAAATTGCATGTGGGTATGGC TGATTTTCTTGTCGCATTACGGGAAGTCGAACCTTCTGCTATCCGTGAGGTCTTCGTGGATATTCCCAACGTGAGCTGGG ATGATGTTGGTGGGTTATCAGATATAAAACAACAGCTTATTGAAGCTATTGAATGGCCCCTTAAGTACCCAGAACTCTTT GAGCAATCCGGCGTGCGACCTCCCAAAGGGTTATTACTTTGCGGCCCGCCGGGTGTGGGAAAGACGCTGATCGCCAAGGC AGTCGCCAATGAAAGTGGTGTTAATGTGATTTCTGTCAAAGGACCAGCACTTATCTCTAAGTATGTTGGTGAATCTGAAA GAGGGGTGAGAGAGGTTTTTCACAAAGCCCGCCAAGCGGCTCCCTGCATTATCTTCTTTGATGAAATCGATGCGCTCGTT CCACTGCGTGGCAGCGGAGGGTCAGATTCCCATGTAGCAGATCGCGTTCTCAGCCAGTTTCTTGCTGAAATGGACGGCAT AGACGATCTCAAAGGCGTGTTTATCTTCGGTGCCACCAACCGCCGTGATCTGATCGATCCAGCCATGCTCAGACCGGGTC GTTTTGACCAAATTGTCAATATCCCACTCCCCGATACTGAGGGACGTACGGAAATTTTTGCTGTTCATTTGCGAGATAAG CCATTGGCTGAGGGGATCGAAGCACAAAACCTTGCTGAACGAACATCCGGCTATAGTAGTGCTGAGATAGCAGCCTTGTG TAACCGTTCGGCCTTGCGGGCTATTCGCCGAGTAGTCGATACAGCGGGTGGAGATCCGACCAAGGGACTCAACGTACTGA TTGAACTGGAAGATTTTGAGTTTACCCTAGCGGAAATGGGGATTAAAACGCAAGATTTGACCTGCAATCAGCCACAAATT AATTCCACAGAGAGTCAGAGTAACGTTTATGAAGAATAG
Upstream 100 bases:
>100_bases AATGGAATGGTTGAAATTAAACTGCGTAAATAATTTTGAATAAAATTCCGATGAAGGGTTGCTAAGCGCCATTCGGCACT AGCTGAAAAGGAGGTTTTTA
Downstream 100 bases:
>100_bases TAACCATTCCGGGCTTGATCCAAACCAAGCCCTCTACCTATATTGTTTTGTTCACGCCGATAGCATTCAGAGCGTAACAA GTCAGGCGATTGAAAAGGAC
Product: cell division protein CDC48
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICYKPMREQSCIQLDGISRSNAG VGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSLVDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGT TQLTIGDEAEEETSSSSLSYEDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKRVVAQLLALMDGLNSRQNIIV IAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEIHTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVL REILPSINLSLASIPCEQLAKLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVFHKARQAAPCIIFFDEIDALV PLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATNRRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDK PLAEGIEAQNLAERTSGYSSAEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI NSTESQSNVYEE
Sequences:
>Translated_732_residues MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICYKPMREQSCIQLDGISRSNAG VGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSLVDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGT TQLTIGDEAEEETSSSSLSYEDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKRVVAQLLALMDGLNSRQNIIV IAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEIHTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVL REILPSINLSLASIPCEQLAKLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVFHKARQAAPCIIFFDEIDALV PLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATNRRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDK PLAEGIEAQNLAERTSGYSSAEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI NSTESQSNVYEE >Mature_732_residues MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICYKPMREQSCIQLDGISRSNAG VGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSLVDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGT TQLTIGDEAEEETSSSSLSYEDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKRVVAQLLALMDGLNSRQNIIV IAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEIHTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVL REILPSINLSLASIPCEQLAKLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVFHKARQAAPCIIFFDEIDALV PLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATNRRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDK PLAEGIEAQNLAERTSGYSSAEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI NSTESQSNVYEE
Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI6005942, Length=681, Percent_Identity=45.374449339207, Blast_Score=588, Evalue=1e-168, Organism=Homo sapiens, GI157671927, Length=528, Percent_Identity=51.8939393939394, Blast_Score=538, Evalue=1e-153, Organism=Homo sapiens, GI45643125, Length=551, Percent_Identity=44.464609800363, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI45643123, Length=551, Percent_Identity=44.464609800363, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI229577436, Length=498, Percent_Identity=40.1606425702811, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI194018488, Length=499, Percent_Identity=37.6753507014028, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4505725, Length=487, Percent_Identity=34.9075975359343, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI24497618, Length=275, Percent_Identity=42.9090909090909, Blast_Score=231, Evalue=3e-60, Organism=Homo sapiens, GI153792536, Length=275, Percent_Identity=41.8181818181818, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI24497435, Length=261, Percent_Identity=43.2950191570881, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI24430151, Length=227, Percent_Identity=46.2555066079295, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI4506209, Length=227, Percent_Identity=45.374449339207, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI5729991, Length=227, Percent_Identity=45.374449339207, Blast_Score=199, Evalue=9e-51, Organism=Homo sapiens, GI24430155, Length=227, Percent_Identity=45.374449339207, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI89064750, Length=227, Percent_Identity=45.374449339207, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI21361144, Length=226, Percent_Identity=44.6902654867257, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI195539395, Length=244, Percent_Identity=42.6229508196721, Blast_Score=198, Evalue=2e-50, Organism=Homo sapiens, GI156564401, Length=471, Percent_Identity=33.7579617834395, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI300192933, Length=245, Percent_Identity=43.265306122449, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI5901990, Length=280, Percent_Identity=38.5714285714286, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI4507173, Length=237, Percent_Identity=38.8185654008439, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI14149767, Length=280, Percent_Identity=38.2142857142857, Blast_Score=176, Evalue=8e-44, Organism=Homo sapiens, GI62177112, Length=280, Percent_Identity=38.2142857142857, Blast_Score=176, Evalue=8e-44, Organism=Homo sapiens, GI7657689, Length=234, Percent_Identity=41.025641025641, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI21327685, Length=234, Percent_Identity=41.025641025641, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI310125282, Length=268, Percent_Identity=41.044776119403, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI310125280, Length=246, Percent_Identity=43.0894308943089, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI7019569, Length=239, Percent_Identity=39.7489539748954, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI226371754, Length=277, Percent_Identity=35.3790613718412, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI17865802, Length=240, Percent_Identity=39.1666666666667, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI31742536, Length=256, Percent_Identity=37.109375, Blast_Score=156, Evalue=8e-38, Organism=Homo sapiens, GI112789543, Length=256, Percent_Identity=37.109375, Blast_Score=156, Evalue=8e-38, Organism=Homo sapiens, GI31377644, Length=260, Percent_Identity=36.5384615384615, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI40806170, Length=235, Percent_Identity=42.5531914893617, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI11875211, Length=235, Percent_Identity=42.5531914893617, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI64084766, Length=338, Percent_Identity=29.585798816568, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI40806173, Length=138, Percent_Identity=39.8550724637681, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI116292174, Length=282, Percent_Identity=30.1418439716312, Blast_Score=102, Evalue=2e-21, Organism=Escherichia coli, GI1789568, Length=239, Percent_Identity=43.5146443514644, Blast_Score=197, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17532375, Length=663, Percent_Identity=45.7013574660633, Blast_Score=578, Evalue=1e-165, Organism=Caenorhabditis elegans, GI17531535, Length=670, Percent_Identity=45.6716417910448, Blast_Score=572, Evalue=1e-163, Organism=Caenorhabditis elegans, GI17537217, Length=563, Percent_Identity=38.5435168738899, Blast_Score=386, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17508053, Length=504, Percent_Identity=34.9206349206349, Blast_Score=270, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17562804, Length=470, Percent_Identity=33.4042553191489, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI25153574, Length=494, Percent_Identity=32.7935222672065, Blast_Score=223, Evalue=4e-58, Organism=Caenorhabditis elegans, GI25144278, Length=261, Percent_Identity=45.2107279693487, Blast_Score=219, Evalue=5e-57, Organism=Caenorhabditis elegans, GI25144281, Length=261, Percent_Identity=45.2107279693487, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17554786, Length=261, Percent_Identity=44.8275862068966, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI133931034, Length=421, Percent_Identity=34.4418052256532, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI193206114, Length=421, Percent_Identity=34.4418052256532, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI193206116, Length=421, Percent_Identity=34.4418052256532, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71987364, Length=244, Percent_Identity=42.6229508196721, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI71987372, Length=244, Percent_Identity=42.6229508196721, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193209502, Length=232, Percent_Identity=46.1206896551724, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17563248, Length=227, Percent_Identity=44.4933920704846, Blast_Score=198, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17563250, Length=227, Percent_Identity=43.1718061674009, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17505546, Length=226, Percent_Identity=42.4778761061947, Blast_Score=195, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17508701, Length=226, Percent_Identity=43.3628318584071, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17554784, Length=229, Percent_Identity=45.8515283842795, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71994521, Length=231, Percent_Identity=41.991341991342, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI133901662, Length=405, Percent_Identity=32.3456790123457, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI133901658, Length=405, Percent_Identity=32.3456790123457, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17554264, Length=216, Percent_Identity=41.2037037037037, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI32563584, Length=277, Percent_Identity=40.072202166065, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17508421, Length=274, Percent_Identity=40.1459854014599, Blast_Score=166, Evalue=6e-41, Organism=Caenorhabditis elegans, GI86561515, Length=239, Percent_Identity=39.7489539748954, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25146157, Length=289, Percent_Identity=35.2941176470588, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI115534323, Length=234, Percent_Identity=40.1709401709402, Blast_Score=159, Evalue=7e-39, Organism=Caenorhabditis elegans, GI17560432, Length=245, Percent_Identity=37.1428571428571, Blast_Score=147, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17541224, Length=240, Percent_Identity=32.9166666666667, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17541226, Length=240, Percent_Identity=32.9166666666667, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17570397, Length=103, Percent_Identity=38.8349514563107, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI32566590, Length=103, Percent_Identity=38.8349514563107, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320077, Length=709, Percent_Identity=45.2750352609309, Blast_Score=588, Evalue=1e-169, Organism=Saccharomyces cerevisiae, GI6323429, Length=534, Percent_Identity=46.6292134831461, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322994, Length=568, Percent_Identity=41.0211267605634, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6321709, Length=437, Percent_Identity=34.5537757437071, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6324000, Length=432, Percent_Identity=34.7222222222222, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322651, Length=501, Percent_Identity=30.5389221556886, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321390, Length=296, Percent_Identity=39.8648648648649, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6320197, Length=231, Percent_Identity=45.4545454545455, Blast_Score=207, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6322704, Length=227, Percent_Identity=44.9339207048458, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6324833, Length=272, Percent_Identity=40.0735294117647, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6324691, Length=226, Percent_Identity=44.6902654867257, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6320602, Length=232, Percent_Identity=44.3965517241379, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319554, Length=411, Percent_Identity=33.8199513381995, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6325281, Length=238, Percent_Identity=40.7563025210084, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6323736, Length=230, Percent_Identity=43.4782608695652, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6325431, Length=237, Percent_Identity=40.084388185654, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6320854, Length=236, Percent_Identity=40.6779661016949, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321465, Length=230, Percent_Identity=37.3913043478261, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6325183, Length=238, Percent_Identity=36.9747899159664, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6320887, Length=292, Percent_Identity=30.4794520547945, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI17137560, Length=690, Percent_Identity=44.9275362318841, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI161076486, Length=694, Percent_Identity=44.8126801152738, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI161076488, Length=660, Percent_Identity=46.0606060606061, Blast_Score=580, Evalue=1e-165, Organism=Drosophila melanogaster, GI19921202, Length=530, Percent_Identity=38.1132075471698, Blast_Score=356, Evalue=3e-98, Organism=Drosophila melanogaster, GI24660075, Length=272, Percent_Identity=45.9558823529412, Blast_Score=271, Evalue=2e-72, Organism=Drosophila melanogaster, GI281365776, Length=272, Percent_Identity=45.9558823529412, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI45552965, Length=272, Percent_Identity=45.9558823529412, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24656825, Length=528, Percent_Identity=31.0606060606061, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI281363136, Length=542, Percent_Identity=32.1033210332103, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI78707192, Length=542, Percent_Identity=32.1033210332103, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24656820, Length=547, Percent_Identity=29.981718464351, Blast_Score=232, Evalue=8e-61, Organism=Drosophila melanogaster, GI19920408, Length=261, Percent_Identity=44.8275862068966, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI21355121, Length=525, Percent_Identity=29.5238095238095, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24651451, Length=260, Percent_Identity=44.6153846153846, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24652279, Length=198, Percent_Identity=50.5050505050505, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI18860063, Length=229, Percent_Identity=46.7248908296943, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI24649446, Length=227, Percent_Identity=45.374449339207, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI281361487, Length=229, Percent_Identity=45.8515283842795, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI17137738, Length=227, Percent_Identity=45.374449339207, Blast_Score=203, Evalue=4e-52, Organism=Drosophila melanogaster, GI24640100, Length=244, Percent_Identity=43.0327868852459, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17738151, Length=231, Percent_Identity=43.2900432900433, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24658770, Length=240, Percent_Identity=43.75, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24663015, Length=246, Percent_Identity=41.4634146341463, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI28573010, Length=389, Percent_Identity=35.73264781491, Blast_Score=182, Evalue=9e-46, Organism=Drosophila melanogaster, GI17864540, Length=445, Percent_Identity=32.1348314606742, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI24665814, Length=234, Percent_Identity=41.025641025641, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI28574878, Length=234, Percent_Identity=41.025641025641, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI24639391, Length=232, Percent_Identity=43.1034482758621, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581396, Length=287, Percent_Identity=36.9337979094077, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24644145, Length=243, Percent_Identity=39.5061728395062, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI18859657, Length=240, Percent_Identity=40, Blast_Score=166, Evalue=6e-41, Organism=Drosophila melanogaster, GI281360142, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI21357333, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI281360146, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI281360138, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI281360136, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI24644411, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI281360144, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=8e-40, Organism=Drosophila melanogaster, GI281360140, Length=269, Percent_Identity=36.4312267657993, Blast_Score=162, Evalue=8e-40, Organism=Drosophila melanogaster, GI20129423, Length=235, Percent_Identity=36.5957446808511, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI20129529, Length=235, Percent_Identity=35.7446808510638, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI28571849, Length=271, Percent_Identity=34.3173431734317, Blast_Score=143, Evalue=5e-34, Organism=Drosophila melanogaster, GI28571847, Length=271, Percent_Identity=34.3173431734317, Blast_Score=143, Evalue=5e-34, Organism=Drosophila melanogaster, GI24639486, Length=233, Percent_Identity=31.3304721030043, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI45554047, Length=166, Percent_Identity=40.9638554216867, Blast_Score=126, Evalue=7e-29, Organism=Drosophila melanogaster, GI20129417, Length=166, Percent_Identity=31.9277108433735, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583262, Length=166, Percent_Identity=31.9277108433735, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 - InterPro: IPR015415 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 80030; Mature: 80030
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00674 AAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH KPMREQSCIQLDGISRSNAGVGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSL CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHH VDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGTTQLTIGDEAEEETSSSSLSY HCCEEEEECCEEEEEEECCCCEEEEEECCCCCCCEEECCCEEEEECCCCHHHCCCCCCCH EDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKR CCEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHH VVAQLLALMDGLNSRQNIIVIAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEI HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEE HTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVLREILPSINLSLASIPCEQLA ECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF HHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVF HHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHH HKARQAAPCIIFFDEIDALVPLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATN HHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC RRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDKPLAEGIEAQNLAERTSGYSS CCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHCCCCHHHHHHHHCCCCH AEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI HHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEHHHCCCCCCCCCCCCCCC NSTESQSNVYEE CCCCCCCCCCCC >Mature Secondary Structure MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH KPMREQSCIQLDGISRSNAGVGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSL CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHH VDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGTTQLTIGDEAEEETSSSSLSY HCCEEEEECCEEEEEEECCCCEEEEEECCCCCCCEEECCCEEEEECCCCHHHCCCCCCCH EDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKR CCEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHH VVAQLLALMDGLNSRQNIIVIAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEI HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEE HTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVLREILPSINLSLASIPCEQLA ECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF HHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVF HHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHH HKARQAAPCIIFFDEIDALVPLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATN HHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC RRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDKPLAEGIEAQNLAERTSGYSS CCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHCCCCHHHHHHHHCCCCH AEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI HHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEHHHCCCCCCCCCCCCCCC NSTESQSNVYEE CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]