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The map label for this gene is 119944995

Identifier: 119944995

GI number: 119944995

Start: 1556225

End: 1556758

Strand: Direct

Name: 119944995

Synonym: Ping_1246

Alternate gene names: NA

Gene position: 1556225-1556758 (Clockwise)

Preceding gene: 119944994

Following gene: 119944996

Centisome position: 34.13

GC content: 42.88

Gene sequence:

>534_bases
ATGAAGAAAAAAACAGATGATTCAAAAAACAGTGAAAGTAACGACTTAGGTGGTGTCTTTCAGGGTTTAGCCAAACTGGT
TGAGACGCTCGGTGATCTCGCTGACAAAGGAGCGGAGCTCAAACGTAGTGGTGAATTCAAAATATCAGGTCAGGAAGATA
ATAAAGATTTGAAAGGCGTCTATGGTTTTTCAATAAAGACGGGGATCAACGAGAAGGGGGATCAGGATATCAATGTACAA
CCCTTCGGCAACGTACATCGAAATGAGGAAACGGGAGAATCTGTTATTATGGAGGTCAGAGAACCTCTGGTGGATATTTT
TGATGAAGATGAATATGTATTGGTCGTCGCGGAGATGCCTGGAATTAGCGCAGAGGATTTACGGCTGGAGCTGCACGACG
ACATTTTGGATTTGACGGCAGAGAAAGGAAATAACAAATACCACAAAGAGCTGCTGCTGCCAGCGACATTCACCACCGAG
CAAATGGATATTTCGGTGAAGAATGGAATGGTTGAAATTAAACTGCGTAAATAA

Upstream 100 bases:

>100_bases
AATGGTAACAAGGCCAAAGCGGCCCGCATCCTGAAAATAGATTATAAAACGCTACTTAACAAAGTAAAGTATTATGAATT
AAAATAGAGAGGATATGAAA

Downstream 100 bases:

>100_bases
TTTTGAATAAAATTCCGATGAAGGGTTGCTAAGCGCCATTCGGCACTAGCTGAAAAGGAGGTTTTTAATGAATGAAAAAA
GCACATCACCCCTTATGCTT

Product: heat shock protein, HSP20 family protein

Products: NA

Alternate protein names: Small Heat Shock Protein; Heat Shock Protein; Hsp20/Alpha Crystallin Family Protein; HSP20 Family Protein; Small Heat Shock Protein Hsp; Heat Shock Protein HSP; Chaperonin Hsp

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKKKTDDSKNSESNDLGGVFQGLAKLVETLGDLADKGAELKRSGEFKISGQEDNKDLKGVYGFSIKTGINEKGDQDINVQ
PFGNVHRNEETGESVIMEVREPLVDIFDEDEYVLVVAEMPGISAEDLRLELHDDILDLTAEKGNNKYHKELLLPATFTTE
QMDISVKNGMVEIKLRK

Sequences:

>Translated_177_residues
MKKKTDDSKNSESNDLGGVFQGLAKLVETLGDLADKGAELKRSGEFKISGQEDNKDLKGVYGFSIKTGINEKGDQDINVQ
PFGNVHRNEETGESVIMEVREPLVDIFDEDEYVLVVAEMPGISAEDLRLELHDDILDLTAEKGNNKYHKELLLPATFTTE
QMDISVKNGMVEIKLRK
>Mature_177_residues
MKKKTDDSKNSESNDLGGVFQGLAKLVETLGDLADKGAELKRSGEFKISGQEDNKDLKGVYGFSIKTGINEKGDQDINVQ
PFGNVHRNEETGESVIMEVREPLVDIFDEDEYVLVVAEMPGISAEDLRLELHDDILDLTAEKGNNKYHKELLLPATFTTE
QMDISVKNGMVEIKLRK

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19715; Mature: 19715

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTDDSKNSESNDLGGVFQGLAKLVETLGDLADKGAELKRSGEFKISGQEDNKDLKGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
YGFSIKTGINEKGDQDINVQPFGNVHRNEETGESVIMEVREPLVDIFDEDEYVLVVAEMP
ECEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
GISAEDLRLELHDDILDLTAEKGNNKYHKELLLPATFTTEQMDISVKNGMVEIKLRK
CCCHHHEEEEEHHHHHHHHHCCCCCCCHHEEECCCEECCCCEEEEECCCEEEEEEEC
>Mature Secondary Structure
MKKKTDDSKNSESNDLGGVFQGLAKLVETLGDLADKGAELKRSGEFKISGQEDNKDLKGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
YGFSIKTGINEKGDQDINVQPFGNVHRNEETGESVIMEVREPLVDIFDEDEYVLVVAEMP
ECEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
GISAEDLRLELHDDILDLTAEKGNNKYHKELLLPATFTTEQMDISVKNGMVEIKLRK
CCCHHHEEEEEHHHHHHHHHCCCCCCCHHEEECCCEECCCCEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA