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The map label for this gene is yraN [C]

Identifier: 119944931

GI number: 119944931

Start: 1466045

End: 1466413

Strand: Reverse

Name: yraN [C]

Synonym: Ping_1176

Alternate gene names: 119944931

Gene position: 1466413-1466045 (Counterclockwise)

Preceding gene: 119944932

Following gene: 119944930

Centisome position: 32.16

GC content: 38.21

Gene sequence:

>369_bases
TTGAAGTTGCCTCGCCTACTACAAGCGAGTAACTCAAAAGGGGTACTTGCAGAGAAACAAGCCTTATCTTATTTACAAGA
ACAAGGCTTAAGGTTAATTTGCCAAAATTATTACTGCCGTTTTGGTGAAATAGATTTGATTATGATCGATCAAGATACCC
TTGTTTTTATTGAAGTGCGCTATAGAAAAAACAGTGATTTTGGCGGGCCGTTTGCTTCTATTAATAAAAGCAAACAGCGT
AAAATAATCACCACTGCGAAGCATTATTTGCGAACATTAGAAGATGAACCCTTTTGCCGCTTTGATGCTATTGCTATCGA
CAGCAAATCAACCACACCCGCTTGGATCCAAAATGCCTTTCAAGAATAA

Upstream 100 bases:

>100_bases
GATTATTACTACCCCGGTTTAGGCGGTCAATTAAGCCTGGATTTAAATAATACGGTTCAACCAGCATTGAGTTGGGCAAC
ATACTATCAGGGAGAATTAG

Downstream 100 bases:

>100_bases
GATGATATAACATAATGATAAATGAAAAAATTCACGCACACTTTGCCGAAAGTATTCAAACCTCAATAGTCGCAGCTGAA
GCGCTACCGGAATTAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKLPRLLQASNSKGVLAEKQALSYLQEQGLRLICQNYYCRFGEIDLIMIDQDTLVFIEVRYRKNSDFGGPFASINKSKQR
KIITTAKHYLRTLEDEPFCRFDAIAIDSKSTTPAWIQNAFQE

Sequences:

>Translated_122_residues
MKLPRLLQASNSKGVLAEKQALSYLQEQGLRLICQNYYCRFGEIDLIMIDQDTLVFIEVRYRKNSDFGGPFASINKSKQR
KIITTAKHYLRTLEDEPFCRFDAIAIDSKSTTPAWIQNAFQE
>Mature_122_residues
MKLPRLLQASNSKGVLAEKQALSYLQEQGLRLICQNYYCRFGEIDLIMIDQDTLVFIEVRYRKNSDFGGPFASINKSKQR
KIITTAKHYLRTLEDEPFCRFDAIAIDSKSTTPAWIQNAFQE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=122, Percent_Identity=40.1639344262295, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1176_PSYIN (A1SU47)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942611.1
- STRING:   A1SU47
- GeneID:   4624474
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_1176
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- PhylomeDB:   A1SU47
- BioCyc:   PING357804:PING_1176-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14112; Mature: 14112

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPRLLQASNSKGVLAEKQALSYLQEQGLRLICQNYYCRFGEIDLIMIDQDTLVFIEVR
CCCCCCHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCEECCCEEEEEECCCCEEEEEEE
YRKNSDFGGPFASINKSKQRKIITTAKHYLRTLEDEPFCRFDAIAIDSKSTTPAWIQNAF
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHH
QE
CC
>Mature Secondary Structure
MKLPRLLQASNSKGVLAEKQALSYLQEQGLRLICQNYYCRFGEIDLIMIDQDTLVFIEVR
CCCCCCHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCEECCCEEEEEECCCCEEEEEEE
YRKNSDFGGPFASINKSKQRKIITTAKHYLRTLEDEPFCRFDAIAIDSKSTTPAWIQNAF
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHH
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA