Click here to switch to the map view.

The map label for this gene is yciH [H]

Identifier: 119944918

GI number: 119944918

Start: 1452467

End: 1452793

Strand: Reverse

Name: yciH [H]

Synonym: Ping_1163

Alternate gene names: 119944918

Gene position: 1452793-1452467 (Counterclockwise)

Preceding gene: 119944919

Following gene: 119944914

Centisome position: 31.86

GC content: 40.06

Gene sequence:

>327_bases
ATGGACTTCAGCGACCTTAATCTTGTTTATTCGACCGATGGTGGCAAGATTGATAATCCAAAAATTGAAAAAAAAGCAGC
TAAAGGTGATGGTATTGTTCGCCTTCATCGTGAAACTAAAGGGCGCAAGGGCAAAGGAGTAACTTTAATAAAAGGGCTAG
AATTGGATGAAAAAGCATTAAAAGCACTTGCCAAAGAGATAAAGAAACGCACCGGAACGGGGGGGAGTGTCAAAGATTTC
GTGATAGAGATTCAGGGCGACCAACGGGAAATTATTCAACTTCTTTTAGAGCAAAAAAATTACAAGGTAAAATTAGCCGG
CAGTTGA

Upstream 100 bases:

>100_bases
TAGCCGCTTAGTGGTTATGCACTTCAAAGTTGAATCTGCCAGTATTTAAAAAAGACTCTGGTAGACTTACGCTCACACAA
TTCAGAGAATAGGAATTCAT

Downstream 100 bases:

>100_bases
TAGCAACACGAGCGGCCTTAACAGCATTAAGAAGCAGTATCTTAATCGGGTGCTACTAAGCCCATTCAAGCACTAGAATA
ATAGGCAGTTGGCGGGATGG

Product: translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDFSDLNLVYSTDGGKIDNPKIEKKAAKGDGIVRLHRETKGRKGKGVTLIKGLELDEKALKALAKEIKKRTGTGGSVKDF
VIEIQGDQREIIQLLLEQKNYKVKLAGS

Sequences:

>Translated_108_residues
MDFSDLNLVYSTDGGKIDNPKIEKKAAKGDGIVRLHRETKGRKGKGVTLIKGLELDEKALKALAKEIKKRTGTGGSVKDF
VIEIQGDQREIIQLLLEQKNYKVKLAGS
>Mature_108_residues
MDFSDLNLVYSTDGGKIDNPKIEKKAAKGDGIVRLHRETKGRKGKGVTLIKGLELDEKALKALAKEIKKRTGTGGSVKDF
VIEIQGDQREIIQLLLEQKNYKVKLAGS

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=107, Percent_Identity=57.9439252336449, Blast_Score=121, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11894; Mature: 11894

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSDLNLVYSTDGGKIDNPKIEKKAAKGDGIVRLHRETKGRKGKGVTLIKGLELDEKAL
CCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHH
KALAKEIKKRTGTGGSVKDFVIEIQGDQREIIQLLLEQKNYKVKLAGS
HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MDFSDLNLVYSTDGGKIDNPKIEKKAAKGDGIVRLHRETKGRKGKGVTLIKGLELDEKAL
CCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHH
KALAKEIKKRTGTGGSVKDFVIEIQGDQREIIQLLLEQKNYKVKLAGS
HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]