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The map label for this gene is ybeB [H]

Identifier: 119944893

GI number: 119944893

Start: 1425287

End: 1425613

Strand: Reverse

Name: ybeB [H]

Synonym: Ping_1137

Alternate gene names: 119944893

Gene position: 1425613-1425287 (Counterclockwise)

Preceding gene: 119944910

Following gene: 119944892

Centisome position: 31.27

GC content: 40.67

Gene sequence:

>327_bases
TTGCAAGACGCACAATTAAAAAAATTTGTATTACAACATCTTGAAGATTTCAAAGCGAAAGATATTACTGTAATCGATGT
TTCTGCCACCTCAGATGTAACTGATACTATGATTATCTGTACGGGTAATTCTAAGCGTCATGTTCGTTCTGTCGCAGAAC
AAACCGCACTGGCAGCCAAGAATGCAGGTGAATCCCCGTTAGGTATCGAGGGCTTAGAGGGCAGTGAGTGGGTATTACTG
GACTTGGGTAATGTTGTTGTCCACGTTATGCAGGATGAAACAAGACAGTTTTATCAACTTGAAAAACTTTGGGAACAGTC
TGCTTAA

Upstream 100 bases:

>100_bases
AAAAAGGTCAAATGATCATCAAGACTATCCCGGCAGAGATTGGTCGTGGTATACTATGTGACTGATTAAATTTTTAACTC
AATTATTAAAGGAATTCCCT

Downstream 100 bases:

>100_bases
TGAAAATTCAGTTAATCGCAGTCGGCACAAAGATGCCCGACTGGGTTGAAAAAGGATACCAAGAATATGCGCGACGCTTT
CCAAAAGAGATGCAACTTGA

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MQDAQLKKFVLQHLEDFKAKDITVIDVSATSDVTDTMIICTGNSKRHVRSVAEQTALAAKNAGESPLGIEGLEGSEWVLL
DLGNVVVHVMQDETRQFYQLEKLWEQSA

Sequences:

>Translated_108_residues
MQDAQLKKFVLQHLEDFKAKDITVIDVSATSDVTDTMIICTGNSKRHVRSVAEQTALAAKNAGESPLGIEGLEGSEWVLL
DLGNVVVHVMQDETRQFYQLEKLWEQSA
>Mature_108_residues
MQDAQLKKFVLQHLEDFKAKDITVIDVSATSDVTDTMIICTGNSKRHVRSVAEQTALAAKNAGESPLGIEGLEGSEWVLL
DLGNVVVHVMQDETRQFYQLEKLWEQSA

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=89, Percent_Identity=38.2022471910112, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081768, Length=104, Percent_Identity=49.0384615384615, Blast_Score=119, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12017; Mature: 12017

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDAQLKKFVLQHLEDFKAKDITVIDVSATSDVTDTMIICTGNSKRHVRSVAEQTALAAK
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
NAGESPLGIEGLEGSEWVLLDLGNVVVHVMQDETRQFYQLEKLWEQSA
CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDAQLKKFVLQHLEDFKAKDITVIDVSATSDVTDTMIICTGNSKRHVRSVAEQTALAAK
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
NAGESPLGIEGLEGSEWVLLDLGNVVVHVMQDETRQFYQLEKLWEQSA
CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]