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The map label for this gene is ychJ [C]

Identifier: 119944861

GI number: 119944861

Start: 1377273

End: 1377749

Strand: Reverse

Name: ychJ [C]

Synonym: Ping_1103

Alternate gene names: 119944861

Gene position: 1377749-1377273 (Counterclockwise)

Preceding gene: 119944862

Following gene: 119944860

Centisome position: 30.22

GC content: 37.74

Gene sequence:

>477_bases
ATGTCTAAATTAAATCAGCAAACCTGCCCTTGTCAAAGTGAAAAAACATATCAACAATGTTGTTTTCCATTTCATATAAA
AACCGTTAAACCTGTTACCTGCGAGCAACTGATGCGCTCCCGTTTTAGTGCCTTTGTGTATCAACTAGGTGATTATTTAT
ATAATACTTATCATCCTGACTACCGGGGGGATTTGAGTGTTGAAGTCTTAACCGAACAAACGGTTGATTGGAAAAACTTA
CAAATTTTAAGCACGGCAAGTTTTTCCGATTCAGGTTACGTGGAATTTAAAGCCTGGTACTTAGATCAGGGTAAACTCTT
CTGTCACCATGAACGTTCTAATTTTGTGAAAGAAAATAATGGTTGGCTTTATTGTGATGGACTTATTTATCCTGAGCAAA
AATCAGGTAAGATACCACGCAATGACCCCTGTCCCTGCGGCAGCGGTAAAAAACACAAAAAGTGTTGTGCTAAATAA

Upstream 100 bases:

>100_bases
CATAATGATGCATACAATCTTGCCTAACTAAATGTAAATGCTTAGTTAACTTTATAAAGCGTTCCGCGGAACGCTTTTTT
TATACGCAGCCGAATATAAA

Downstream 100 bases:

>100_bases
CGCAGCGCATTAGTCACAACAAAGAAGAGATGAAAAATGGAAAAGAAAACACTACTGACGGATTGCCCTGACAGCAAAGG
TCTGATTGCTCAAATCACCA

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSKLNQQTCPCQSEKTYQQCCFPFHIKTVKPVTCEQLMRSRFSAFVYQLGDYLYNTYHPDYRGDLSVEVLTEQTVDWKNL
QILSTASFSDSGYVEFKAWYLDQGKLFCHHERSNFVKENNGWLYCDGLIYPEQKSGKIPRNDPCPCGSGKKHKKCCAK

Sequences:

>Translated_158_residues
MSKLNQQTCPCQSEKTYQQCCFPFHIKTVKPVTCEQLMRSRFSAFVYQLGDYLYNTYHPDYRGDLSVEVLTEQTVDWKNL
QILSTASFSDSGYVEFKAWYLDQGKLFCHHERSNFVKENNGWLYCDGLIYPEQKSGKIPRNDPCPCGSGKKHKKCCAK
>Mature_157_residues
SKLNQQTCPCQSEKTYQQCCFPFHIKTVKPVTCEQLMRSRFSAFVYQLGDYLYNTYHPDYRGDLSVEVLTEQTVDWKNLQ
ILSTASFSDSGYVEFKAWYLDQGKLFCHHERSNFVKENNGWLYCDGLIYPEQKSGKIPRNDPCPCGSGKKHKKCCAK

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=156, Percent_Identity=39.7435897435897, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18366; Mature: 18235

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLNQQTCPCQSEKTYQQCCFPFHIKTVKPVTCEQLMRSRFSAFVYQLGDYLYNTYHPD
CCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRGDLSVEVLTEQTVDWKNLQILSTASFSDSGYVEFKAWYLDQGKLFCHHERSNFVKENN
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCEECCC
GWLYCDGLIYPEQKSGKIPRNDPCPCGSGKKHKKCCAK
CEEEECCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SKLNQQTCPCQSEKTYQQCCFPFHIKTVKPVTCEQLMRSRFSAFVYQLGDYLYNTYHPD
CCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRGDLSVEVLTEQTVDWKNLQILSTASFSDSGYVEFKAWYLDQGKLFCHHERSNFVKENN
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCEECCC
GWLYCDGLIYPEQKSGKIPRNDPCPCGSGKKHKKCCAK
CEEEECCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA