| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is trpE [H]
Identifier: 119944818
GI number: 119944818
Start: 1334018
End: 1335682
Strand: Reverse
Name: trpE [H]
Synonym: Ping_1060
Alternate gene names: 119944818
Gene position: 1335682-1334018 (Counterclockwise)
Preceding gene: 119944823
Following gene: 119944817
Centisome position: 29.29
GC content: 41.68
Gene sequence:
>1665_bases ATGAATACTAATCATCCCATCGGCGTATTAAAAAGCCTTTCAGCAGACTGTCAATATATCAGTGACTCGCTTGGTTTATT TCAAACTTTTAGTGCCAATACAGACAATCATCTATTATTTGATTCTGCCGAAATTGAAAGTAAAAACCATCTTAAAAGCT TAATGCTGATTGATGCCTGTATGAAAATCACCTGTCATGGTCTAACCGTCACACTCGATGCCTTAACTGATAACGGTAAA GACCTGCTTACTTTTATTACACCGCAATTTTCCACACAAATAATCAGCCAACATTCCGCCCATCAACTACAGCTTGTTTT CCCAGCATCAGACGCCACTGGCGATGAAGATCAGCGTTTAAAATCATTATCACCAGTAGATGCTTTGCGTTTTATTGTTA AAGGTATTAAAACGCCATCATCTCATCAGCAGGCATTGTTTTTGGGCGGTATCTTTGCCTATGACTTTATCGCTACCTTT GAAGATTTAATGGCAGTGCCTGAGAGTGATAACATCTGTCCTGATTTTATGTTTTATGTCGCTGAAACATTAATGATTCA AAATCATCAAACTCAGAAAGGGGAATTAATCGCTTCGGTATTTGGCGGATTATACTCCGATGAGAATGAGCAGCGCCTGA ATGCGCGTTTAGCAGAAATACAACAACAATGTATTAATTTTGAAACAACCGAAAACCCTGTTACTCCCTTAACCGGAAAA GTCAGTACGGATGTTTCAGATCAAGAATATTGCGCTATTGTTGAAGAGCTTAAAAAATACATCGTAAAAGGAGATATTTT TCAGGTAGTGCCTTCACGTAGTTTTTCGCTTTCTTGCCCTAATCCGATTGCCGCTTATGCAAAACTTAAACAAACAAATC CAAGTCCTTATATGTTTTATTTAAAAGACAGTGATTTCACTCTGTTTGGCGCATCTCCGGAAAGTGCACTTAAATACACC CAAGCCTCAAATGATGTTGAGATTTATCCCATTGCAGGGACTCGCAGACGAGGATTTAATCCCGATGGCAGCATTAACAA AGATTTAGACAGTCGTTTAGAGTTGGAATTACGTTTAGACCAAAAAGAAACATCTGAGCATTTAATGCTGGTTGATTTAG CCCGTAATGACGTGGCGCGCATTAGCGAACCAGGTACCAGGCATGTGGCAGACCTATTAAAAGTAGACCGTTACAGTCAC GTTATGCACTTAGTTTCTCGCGTTATCGGCAAATTACGCACGGATTTAGATGCACTGCACGCCTACCAGGCATGTATGAA TATGGGCACTCTCGTAGGTGCGCCTAAAATCAGTGCATCGAATCTGGTCCGTCAAGTAGAAAAAAAACGCCGTGGCAGTT ACGGTGGTGCAGTCGGTTATATCAACGGCTGTGGTGATATGGATAGCTGTATTGTTATCCGCTCGGCATTTGTAAAAAAT GGTATCGCACAAGCGCAAGCAGGTGCAGGGGTTGTATTTGATTCAATACCACAGGCAGAGGCTGATGAAACCCGTACTAA AGCCGCGGCGGTATTAAATGCGATTGCATTAGCCCATGGCACAACACTTGCGGAAGTATCTCGACCTGATGTGTCTTTAC CTGATACCTCTTTACCTGAAACGCCCTCAACAGGCGCTTCCTCAACCTTAGCTAATGGAGAGTAA
Upstream 100 bases:
>100_bases AAAAAACATGAATAATACCAATAAAATCCTTAAACAATCTTGGCGATGGTGGTGAACACAATCCATAACCCATTAACAGA TATAATTTTAAAGGATAAAA
Downstream 100 bases:
>100_bases AAAGATGGAGATAACTAAAAAACAAACACTCTTTTTCCTGGATAACTTTGACTCTTTTACTTATAACCTGGTTGATCAAT TTAAGGCATTGGGTTATCCG
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MNTNHPIGVLKSLSADCQYISDSLGLFQTFSANTDNHLLFDSAEIESKNHLKSLMLIDACMKITCHGLTVTLDALTDNGK DLLTFITPQFSTQIISQHSAHQLQLVFPASDATGDEDQRLKSLSPVDALRFIVKGIKTPSSHQQALFLGGIFAYDFIATF EDLMAVPESDNICPDFMFYVAETLMIQNHQTQKGELIASVFGGLYSDENEQRLNARLAEIQQQCINFETTENPVTPLTGK VSTDVSDQEYCAIVEELKKYIVKGDIFQVVPSRSFSLSCPNPIAAYAKLKQTNPSPYMFYLKDSDFTLFGASPESALKYT QASNDVEIYPIAGTRRRGFNPDGSINKDLDSRLELELRLDQKETSEHLMLVDLARNDVARISEPGTRHVADLLKVDRYSH VMHLVSRVIGKLRTDLDALHAYQACMNMGTLVGAPKISASNLVRQVEKKRRGSYGGAVGYINGCGDMDSCIVIRSAFVKN GIAQAQAGAGVVFDSIPQAEADETRTKAAAVLNAIALAHGTTLAEVSRPDVSLPDTSLPETPSTGASSTLANGE
Sequences:
>Translated_554_residues MNTNHPIGVLKSLSADCQYISDSLGLFQTFSANTDNHLLFDSAEIESKNHLKSLMLIDACMKITCHGLTVTLDALTDNGK DLLTFITPQFSTQIISQHSAHQLQLVFPASDATGDEDQRLKSLSPVDALRFIVKGIKTPSSHQQALFLGGIFAYDFIATF EDLMAVPESDNICPDFMFYVAETLMIQNHQTQKGELIASVFGGLYSDENEQRLNARLAEIQQQCINFETTENPVTPLTGK VSTDVSDQEYCAIVEELKKYIVKGDIFQVVPSRSFSLSCPNPIAAYAKLKQTNPSPYMFYLKDSDFTLFGASPESALKYT QASNDVEIYPIAGTRRRGFNPDGSINKDLDSRLELELRLDQKETSEHLMLVDLARNDVARISEPGTRHVADLLKVDRYSH VMHLVSRVIGKLRTDLDALHAYQACMNMGTLVGAPKISASNLVRQVEKKRRGSYGGAVGYINGCGDMDSCIVIRSAFVKN GIAQAQAGAGVVFDSIPQAEADETRTKAAAVLNAIALAHGTTLAEVSRPDVSLPDTSLPETPSTGASSTLANGE >Mature_554_residues MNTNHPIGVLKSLSADCQYISDSLGLFQTFSANTDNHLLFDSAEIESKNHLKSLMLIDACMKITCHGLTVTLDALTDNGK DLLTFITPQFSTQIISQHSAHQLQLVFPASDATGDEDQRLKSLSPVDALRFIVKGIKTPSSHQQALFLGGIFAYDFIATF EDLMAVPESDNICPDFMFYVAETLMIQNHQTQKGELIASVFGGLYSDENEQRLNARLAEIQQQCINFETTENPVTPLTGK VSTDVSDQEYCAIVEELKKYIVKGDIFQVVPSRSFSLSCPNPIAAYAKLKQTNPSPYMFYLKDSDFTLFGASPESALKYT QASNDVEIYPIAGTRRRGFNPDGSINKDLDSRLELELRLDQKETSEHLMLVDLARNDVARISEPGTRHVADLLKVDRYSH VMHLVSRVIGKLRTDLDALHAYQACMNMGTLVGAPKISASNLVRQVEKKRRGSYGGAVGYINGCGDMDSCIVIRSAFVKN GIAQAQAGAGVVFDSIPQAEADETRTKAAAVLNAIALAHGTTLAEVSRPDVSLPDTSLPETPSTGASSTLANGE
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=523, Percent_Identity=54.302103250478, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI1788114, Length=397, Percent_Identity=28.7153652392947, Blast_Score=165, Evalue=7e-42, Organism=Escherichia coli, GI1786809, Length=236, Percent_Identity=30.0847457627119, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082077, Length=303, Percent_Identity=26.4026402640264, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=377, Percent_Identity=35.8090185676393, Blast_Score=206, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6324361, Length=392, Percent_Identity=23.9795918367347, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 60476; Mature: 60476
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNHPIGVLKSLSADCQYISDSLGLFQTFSANTDNHLLFDSAEIESKNHLKSLMLIDAC CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCHHCCCHHHHHHHHHHHHH MKITCHGLTVTLDALTDNGKDLLTFITPQFSTQIISQHSAHQLQLVFPASDATGDEDQRL HHHEECCEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHH KSLSPVDALRFIVKGIKTPSSHQQALFLGGIFAYDFIATFEDLMAVPESDNICPDFMFYV HHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AETLMIQNHQTQKGELIASVFGGLYSDENEQRLNARLAEIQQQCINFETTENPVTPLTGK HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VSTDVSDQEYCAIVEELKKYIVKGDIFQVVPSRSFSLSCPNPIAAYAKLKQTNPSPYMFY CCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCHHHHHHHHHCCCCCCEEEE LKDSDFTLFGASPESALKYTQASNDVEIYPIAGTRRRGFNPDGSINKDLDSRLELELRLD EECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QKETSEHLMLVDLARNDVARISEPGTRHVADLLKVDRYSHVMHLVSRVIGKLRTDLDALH CCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQACMNMGTLVGAPKISASNLVRQVEKKRRGSYGGAVGYINGCGDMDSCIVIRSAFVKN HHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHC GIAQAQAGAGVVFDSIPQAEADETRTKAAAVLNAIALAHGTTLAEVSRPDVSLPDTSLPE CHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC TPSTGASSTLANGE CCCCCCCCCCCCCC >Mature Secondary Structure MNTNHPIGVLKSLSADCQYISDSLGLFQTFSANTDNHLLFDSAEIESKNHLKSLMLIDAC CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCHHCCCHHHHHHHHHHHHH MKITCHGLTVTLDALTDNGKDLLTFITPQFSTQIISQHSAHQLQLVFPASDATGDEDQRL HHHEECCEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHH KSLSPVDALRFIVKGIKTPSSHQQALFLGGIFAYDFIATFEDLMAVPESDNICPDFMFYV HHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AETLMIQNHQTQKGELIASVFGGLYSDENEQRLNARLAEIQQQCINFETTENPVTPLTGK HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VSTDVSDQEYCAIVEELKKYIVKGDIFQVVPSRSFSLSCPNPIAAYAKLKQTNPSPYMFY CCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCHHHHHHHHHCCCCCCEEEE LKDSDFTLFGASPESALKYTQASNDVEIYPIAGTRRRGFNPDGSINKDLDSRLELELRLD EECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QKETSEHLMLVDLARNDVARISEPGTRHVADLLKVDRYSHVMHLVSRVIGKLRTDLDALH CCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQACMNMGTLVGAPKISASNLVRQVEKKRRGSYGGAVGYINGCGDMDSCIVIRSAFVKN HHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHC GIAQAQAGAGVVFDSIPQAEADETRTKAAAVLNAIALAHGTTLAEVSRPDVSLPDTSLPE CHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC TPSTGASSTLANGE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]