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The map label for this gene is narT [H]

Identifier: 119944780

GI number: 119944780

Start: 1287267

End: 1288736

Strand: Reverse

Name: narT [H]

Synonym: Ping_1022

Alternate gene names: 119944780

Gene position: 1288736-1287267 (Counterclockwise)

Preceding gene: 119944781

Following gene: 119944779

Centisome position: 28.26

GC content: 44.9

Gene sequence:

>1470_bases
ATGGATAGAACTTCATTTAATATATTATCTTTTACTGGAAAGATGAAAATTCTGCATTTAAGCTGGATGGCTTTTTTTAT
TACTTTTGTTGTCTGGTTTAACTTCGCCCCCCTGCTGCTTGCGGTAAAAGAATCCTTGGGTTTAAGCACCGAAGAGATAA
AAACCCTCTTAATTCTTAACGTCGCCTTAACTATCCCGGCCCGAGTGATTGTCGGTTCATTAACCGACAAATACGGGCCA
AGAGTGGTGTACTCTGCACTGCTGGCGGTTTGTTCTATTCCTTGTTTTATGTTTGCTTTTTCAGATACATTTTTAGAAGC
GGCGATCGCCCGTTTTCTGCTGGGTTTTATCGGTGCAGGTTTTGTCATTGGTATCCGCCTGGTGTCTGAATGGTTTCCAC
ATAACGAACTTGGCACCGCTGAGGGGATCTACGGCGGTTGGGGTAACTTCGGCAGTGCCGCGGCAGCCTTTAGTTTACCA
ACTCTGGCATTACTGTTTGGCGGTGAAGACGGATGGCGCTATGCAACGGCCATCACAGGTCTTATGAGTTTAGTTTTTGC
TTTTGTATTTTATGCTAAGGTTAGCGATACCCCAAAAGGCTCGACCTATTTTAAACCGGCCAATTTAACGGCCATGGAAG
TGACCTCTAAGGGCGATTTTTTCCTATTATTATTAATGAAAATTCCGATGTACGCAGCTCTGGCGTTACTTGCATGGAAA
GTCTCTCCAAGCAATATTGCGATGATTTCAGCTGAAGTGACTTATCTTATTTACGCCACACTGATTGCGCTTTATATTTA
TGAATTATCACAGGTTTGGAAGGTCAATAAATCAATTTTCACGACACCAGTCCCTGAAATTCATCAGTATAAATTCAAAC
AAGTTGCTGTGCTAAATGTCCTTTATTTTGCAACCTTTGGATCTGAGCTTGCCGTGATTTCAATGTTACCCTTGTTCTTT
TCTGAAACCTTTGAATTAACCCCGGTAATGGCGGGTATGGTGGCATCAGCTTATGCCTTTATGAACTTAGTGTCCCGCCC
TGGTGGCGGCTGGATTTCCGATAAATGCGGGCGTAAAATCACTCTGGTGATTCTTACCGCGGGACTGGCCTTGGGTTATC
TGTTAATGGCACAAATTACCAGCGGCTGGACGCTGTGGATTGCAGTTGCAGCGGCGATGTTATGTTCTTTCTTTGTGCAG
GCCGGTGAAGGTGCCGTATTTGCCACCGTACCGCTGATTAAACGCAGAATGACCGGACAGATTGCCGGTATGACCGGGGC
TTACGGTAACGTTGGAGCAGTGGTCTACTTAACGATACTGTCCTTTGTTGATTACCAAACGTTCTTCTACGTGATTGCCG
TGACTGCGTTTTGTGGTTTGGTGACTTTATCTCTGATGGCTGAGCCCAAGGGACAAATGGCCGAGCTTAATCCCGATGGC
AGTGTCACTATGATTGATGTTAGCCACTAA

Upstream 100 bases:

>100_bases
CACGTACAACTGCAAGCGACAGCTTAATTATTAAGTTGAAGCTATTAAAGGAGCCCTATCTGCTAAGCAAATAGGGCACA
AAAAATTAAAGGAAAGAATC

Downstream 100 bases:

>100_bases
ACTAATACTAAAAGAACCAAAAGAACTAAAACGGCGGGTGTTGATTATATTAACACCCGCCATTTTTTTCTCTATTGTCT
AAAAAGGAAAGCATTAATTT

Product: nitrite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MDRTSFNILSFTGKMKILHLSWMAFFITFVVWFNFAPLLLAVKESLGLSTEEIKTLLILNVALTIPARVIVGSLTDKYGP
RVVYSALLAVCSIPCFMFAFSDTFLEAAIARFLLGFIGAGFVIGIRLVSEWFPHNELGTAEGIYGGWGNFGSAAAAFSLP
TLALLFGGEDGWRYATAITGLMSLVFAFVFYAKVSDTPKGSTYFKPANLTAMEVTSKGDFFLLLLMKIPMYAALALLAWK
VSPSNIAMISAEVTYLIYATLIALYIYELSQVWKVNKSIFTTPVPEIHQYKFKQVAVLNVLYFATFGSELAVISMLPLFF
SETFELTPVMAGMVASAYAFMNLVSRPGGGWISDKCGRKITLVILTAGLALGYLLMAQITSGWTLWIAVAAAMLCSFFVQ
AGEGAVFATVPLIKRRMTGQIAGMTGAYGNVGAVVYLTILSFVDYQTFFYVIAVTAFCGLVTLSLMAEPKGQMAELNPDG
SVTMIDVSH

Sequences:

>Translated_489_residues
MDRTSFNILSFTGKMKILHLSWMAFFITFVVWFNFAPLLLAVKESLGLSTEEIKTLLILNVALTIPARVIVGSLTDKYGP
RVVYSALLAVCSIPCFMFAFSDTFLEAAIARFLLGFIGAGFVIGIRLVSEWFPHNELGTAEGIYGGWGNFGSAAAAFSLP
TLALLFGGEDGWRYATAITGLMSLVFAFVFYAKVSDTPKGSTYFKPANLTAMEVTSKGDFFLLLLMKIPMYAALALLAWK
VSPSNIAMISAEVTYLIYATLIALYIYELSQVWKVNKSIFTTPVPEIHQYKFKQVAVLNVLYFATFGSELAVISMLPLFF
SETFELTPVMAGMVASAYAFMNLVSRPGGGWISDKCGRKITLVILTAGLALGYLLMAQITSGWTLWIAVAAAMLCSFFVQ
AGEGAVFATVPLIKRRMTGQIAGMTGAYGNVGAVVYLTILSFVDYQTFFYVIAVTAFCGLVTLSLMAEPKGQMAELNPDG
SVTMIDVSH
>Mature_489_residues
MDRTSFNILSFTGKMKILHLSWMAFFITFVVWFNFAPLLLAVKESLGLSTEEIKTLLILNVALTIPARVIVGSLTDKYGP
RVVYSALLAVCSIPCFMFAFSDTFLEAAIARFLLGFIGAGFVIGIRLVSEWFPHNELGTAEGIYGGWGNFGSAAAAFSLP
TLALLFGGEDGWRYATAITGLMSLVFAFVFYAKVSDTPKGSTYFKPANLTAMEVTSKGDFFLLLLMKIPMYAALALLAWK
VSPSNIAMISAEVTYLIYATLIALYIYELSQVWKVNKSIFTTPVPEIHQYKFKQVAVLNVLYFATFGSELAVISMLPLFF
SETFELTPVMAGMVASAYAFMNLVSRPGGGWISDKCGRKITLVILTAGLALGYLLMAQITSGWTLWIAVAAAMLCSFFVQ
AGEGAVFATVPLIKRRMTGQIAGMTGAYGNVGAVVYLTILSFVDYQTFFYVIAVTAFCGLVTLSLMAEPKGQMAELNPDG
SVTMIDVSH

Specific function: Probably required for nitrate uptake under anoxic conditions. Also possibly involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]

COG id: COG2223

COG function: function code P; Nitrate/nitrite transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 53230; Mature: 53230

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTSFNILSFTGKMKILHLSWMAFFITFVVWFNFAPLLLAVKESLGLSTEEIKTLLILN
CCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VALTIPARVIVGSLTDKYGPRVVYSALLAVCSIPCFMFAFSDTFLEAAIARFLLGFIGAG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIGIRLVSEWFPHNELGTAEGIYGGWGNFGSAAAAFSLPTLALLFGGEDGWRYATAITG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHH
LMSLVFAFVFYAKVSDTPKGSTYFKPANLTAMEVTSKGDFFLLLLMKIPMYAALALLAWK
HHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
VSPSNIAMISAEVTYLIYATLIALYIYELSQVWKVNKSIFTTPVPEIHQYKFKQVAVLNV
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LYFATFGSELAVISMLPLFFSETFELTPVMAGMVASAYAFMNLVSRPGGGWISDKCGRKI
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEE
TLVILTAGLALGYLLMAQITSGWTLWIAVAAAMLCSFFVQAGEGAVFATVPLIKRRMTGQ
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCH
IAGMTGAYGNVGAVVYLTILSFVDYQTFFYVIAVTAFCGLVTLSLMAEPKGQMAELNPDG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
SVTMIDVSH
CEEEEEECC
>Mature Secondary Structure
MDRTSFNILSFTGKMKILHLSWMAFFITFVVWFNFAPLLLAVKESLGLSTEEIKTLLILN
CCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VALTIPARVIVGSLTDKYGPRVVYSALLAVCSIPCFMFAFSDTFLEAAIARFLLGFIGAG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIGIRLVSEWFPHNELGTAEGIYGGWGNFGSAAAAFSLPTLALLFGGEDGWRYATAITG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHH
LMSLVFAFVFYAKVSDTPKGSTYFKPANLTAMEVTSKGDFFLLLLMKIPMYAALALLAWK
HHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
VSPSNIAMISAEVTYLIYATLIALYIYELSQVWKVNKSIFTTPVPEIHQYKFKQVAVLNV
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LYFATFGSELAVISMLPLFFSETFELTPVMAGMVASAYAFMNLVSRPGGGWISDKCGRKI
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEE
TLVILTAGLALGYLLMAQITSGWTLWIAVAAAMLCSFFVQAGEGAVFATVPLIKRRMTGQ
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCH
IAGMTGAYGNVGAVVYLTILSFVDYQTFFYVIAVTAFCGLVTLSLMAEPKGQMAELNPDG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
SVTMIDVSH
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9082911; 12426351 [H]