| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is sufE [H]
Identifier: 119944370
GI number: 119944370
Start: 779767
End: 780168
Strand: Direct
Name: sufE [H]
Synonym: Ping_0597
Alternate gene names: 119944370
Gene position: 779767-780168 (Clockwise)
Preceding gene: 119944369
Following gene: 119944371
Centisome position: 17.1
GC content: 33.83
Gene sequence:
>402_bases ATGGCATTGTCTTTACCGACAACAGAACAATTATTAAATGATTTTCAAGAAAATAAAAGTTGGGATAAACAGTACAAATT AATTATTCAATGGGGTAAGAAACTACCGGATATGGATTCACAGGATAAAATTGAAACTAATCGGGTTGAAGGGTGTGAAA GTTTAGCCTGGTTAATAATTGAGAAAGAGGAAGATTTTTATACCTTTAACATGGACAGTGAGACGCGTGTCGTCAAAGGG TTAATGATGATTTTATTAATTATCTATCAGGGTAAAAACGCGGAGCAAATCCGCCATTTTGATATTCATCACTATTTTGA AAAACTGGGTTTACTTAAGCATTTAAGCCCGTCTCGTGCGAATGGATTATTTACCATAGTACAAAAAATTCAGGAGATAT AG
Upstream 100 bases:
>100_bases ACAATGGCTTGTTATAAAGAAGTGTGCCGTTTTATATTTTTTGGTAAACTTTTAAAGCAAGCAAATGCACAAACGTTGGT TAAATTAAGGATAGGTAACA
Downstream 100 bases:
>100_bases TCCTTTGAAAATAAATAAGTTTTTATCTTTTTTGTTGTTTTTTTTGTTGTTGACAACAAGCCGGTTAGGGCTTGCGGAAG AAGTTGATTTAGTGCCTGTC
Product: Fe-S metabolism associated SufE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MALSLPTTEQLLNDFQENKSWDKQYKLIIQWGKKLPDMDSQDKIETNRVEGCESLAWLIIEKEEDFYTFNMDSETRVVKG LMMILLIIYQGKNAEQIRHFDIHHYFEKLGLLKHLSPSRANGLFTIVQKIQEI
Sequences:
>Translated_133_residues MALSLPTTEQLLNDFQENKSWDKQYKLIIQWGKKLPDMDSQDKIETNRVEGCESLAWLIIEKEEDFYTFNMDSETRVVKG LMMILLIIYQGKNAEQIRHFDIHHYFEKLGLLKHLSPSRANGLFTIVQKIQEI >Mature_132_residues ALSLPTTEQLLNDFQENKSWDKQYKLIIQWGKKLPDMDSQDKIETNRVEGCESLAWLIIEKEEDFYTFNMDSETRVVKGL MMILLIIYQGKNAEQIRHFDIHHYFEKLGLLKHLSPSRANGLFTIVQKIQEI
Specific function: Participates in cysteine desulfuration mediated by sufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Fun
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sufE family [H]
Homologues:
Organism=Escherichia coli, GI1787969, Length=124, Percent_Identity=35.4838709677419, Blast_Score=98, Evalue=2e-22, Organism=Escherichia coli, GI1789176, Length=125, Percent_Identity=34.4, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003808 [H]
Pfam domain/function: PF02657 SufE [H]
EC number: NA
Molecular weight: Translated: 15703; Mature: 15572
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSLPTTEQLLNDFQENKSWDKQYKLIIQWGKKLPDMDSQDKIETNRVEGCESLAWLII CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEE EKEEDFYTFNMDSETRVVKGLMMILLIIYQGKNAEQIRHFDIHHYFEKLGLLKHLSPSRA ECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NGLFTIVQKIQEI CHHHHHHHHHHCC >Mature Secondary Structure ALSLPTTEQLLNDFQENKSWDKQYKLIIQWGKKLPDMDSQDKIETNRVEGCESLAWLII CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEE EKEEDFYTFNMDSETRVVKGLMMILLIIYQGKNAEQIRHFDIHHYFEKLGLLKHLSPSRA ECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NGLFTIVQKIQEI CHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA