| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944363
Identifier: 119944363
GI number: 119944363
Start: 772509
End: 772934
Strand: Direct
Name: 119944363
Synonym: Ping_0590
Alternate gene names: NA
Gene position: 772509-772934 (Clockwise)
Preceding gene: 119944362
Following gene: 119944364
Centisome position: 16.94
GC content: 36.62
Gene sequence:
>426_bases ATGCCTACGTTAATTAAAAATGAAGCAAGTTGTCTATGCGGTAGTGTAAAAATAAACGTTGCCAATGTAAATCCTAAATT CACGGTATGCCACTGTGATGCCTGTCGAAATTGGGGAGGAGGCCCTTCTTTTTCAGTTCAGTGCGGTACTGAGGTGAATA TTAAAGGTGCTGAAAATATCAAAGAATATAATTCATCATTCTGGGCTTCGAGGGGGTTTTGTTCTACTTGTGGTACTCAT TTATTCTACAGATTGAATCAAAGTGGTGGTTATAATATTCCTGTCGGCTTATTTTCAAAGGTTAATGATTTTGTCATGAC GATGCAGTATTTTAGTGATCAACGGCCTGACTATTATTGTTTTTCCAATCAAACCGAGGAAATGACCAGAGCTGAAATTA AATCTTACTTTTCATCGAAAGTATAA
Upstream 100 bases:
>100_bases AAATGTCAATTAATGTGATTGGTGTTTTAAACTGGCTGGCTGCAAATAAAAAATTTTACAGCCTGATTATATTTGCACCA TCATTTGGGAGTAATACGGA
Downstream 100 bases:
>100_bases CAAAAGTTGTTTAACTGGCAGGGGGAGTGAGTGTTTAAAATAACTAAAGGGTTGTTTTTATAAGTTGTTGAGCTCACTTT AACCTAAATTGAAAGACTAT
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutamate Synthase; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPTLIKNEASCLCGSVKINVANVNPKFTVCHCDACRNWGGGPSFSVQCGTEVNIKGAENIKEYNSSFWASRGFCSTCGTH LFYRLNQSGGYNIPVGLFSKVNDFVMTMQYFSDQRPDYYCFSNQTEEMTRAEIKSYFSSKV
Sequences:
>Translated_141_residues MPTLIKNEASCLCGSVKINVANVNPKFTVCHCDACRNWGGGPSFSVQCGTEVNIKGAENIKEYNSSFWASRGFCSTCGTH LFYRLNQSGGYNIPVGLFSKVNDFVMTMQYFSDQRPDYYCFSNQTEEMTRAEIKSYFSSKV >Mature_140_residues PTLIKNEASCLCGSVKINVANVNPKFTVCHCDACRNWGGGPSFSVQCGTEVNIKGAENIKEYNSSFWASRGFCSTCGTHL FYRLNQSGGYNIPVGLFSKVNDFVMTMQYFSDQRPDYYCFSNQTEEMTRAEIKSYFSSKV
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15803; Mature: 15672
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLIKNEASCLCGSVKINVANVNPKFTVCHCDACRNWGGGPSFSVQCGTEVNIKGAENI CCCCCCCCCCEEEEEEEEEEEECCCCEEEEECHHHCCCCCCCCEEEEECCEEECCCHHHH KEYNSSFWASRGFCSTCGTHLFYRLNQSGGYNIPVGLFSKVNDFVMTMQYFSDQRPDYYC HHHHHHHCCCCCCHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE FSNQTEEMTRAEIKSYFSSKV ECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLIKNEASCLCGSVKINVANVNPKFTVCHCDACRNWGGGPSFSVQCGTEVNIKGAENI CCCCCCCCCEEEEEEEEEEEECCCCEEEEECHHHCCCCCCCCEEEEECCEEECCCHHHH KEYNSSFWASRGFCSTCGTHLFYRLNQSGGYNIPVGLFSKVNDFVMTMQYFSDQRPDYYC HHHHHHHCCCCCCHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE FSNQTEEMTRAEIKSYFSSKV ECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA