| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yedZ [H]
Identifier: 119944350
GI number: 119944350
Start: 757034
End: 757654
Strand: Direct
Name: yedZ [H]
Synonym: Ping_0577
Alternate gene names: 119944350
Gene position: 757034-757654 (Clockwise)
Preceding gene: 119944349
Following gene: 119944358
Centisome position: 16.6
GC content: 38.0
Gene sequence:
>621_bases GTGAAAATTTCTAAAACGGGTCTATTATCTGCTAAGGCGCTGATTCATTTGGCTTCTCTGTCCACGTTTTTATATTTGTG GCTGTTGGTCGAGCAAAATGCACTAGGTGCTGACCCGGTTAAAGAGATGATTCATTTTTTAGGTAAAACGGCGCTTAATT ATCTGTTAATAACCCTTTGTATTTCGCCTTTAGCGCGCCGTTTTAAACAACCCTTATTAATTCAATTACGGCGTGTATTA GGTTTATATTGTTTTTTTTGGGCGTGTTTACATCTTTTGGTTTTTATTTGGTTAGATCTCAATTGGGAGGTGACTTTATT TGCAGAAGAAGTAGTCAAACGTCCTTATATGACCCTGGGTGCATTGACCTGGGTGATTTTATTGGCGTTAAGTATCACCT CTATTAATGTTATCCGCAGGCGGATGAAGCGCGCGTGGTTGACCTTACACCGAACTATTTATTGGGCTGTTCTATTGGCA ACTATTCATTATTACTGGTCGGTTAAATCTGGTTTGATTGAGCCTATCATTTATTTTGCGATCTGTTTTACCCTGCTTGC GCAGCGTAAAGATTACTTTAAATCTTTTTTAAAGCATTACGCTAAGAAAAAATCAGTTTAA
Upstream 100 bases:
>100_bases CTCTCGCAAGCCGACTCTGCCTTTTAATGGTTATCAGGAAGAAGTTGCTTCTCTGTATAAAGGGTTAGATTTAACCCGTT ATTATTAAAAAGGAGCACAG
Downstream 100 bases:
>100_bases GGATTTCTCTTAATAGTGATTTTTCAATGAAGATAAAACAGCTCAATGAGTTTTGCTTCTGAGTATCATTTTAACCGGAA TATTTGTGCAGGAGATTAAT
Product: ferric reductase domain-containing protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKISKTGLLSAKALIHLASLSTFLYLWLLVEQNALGADPVKEMIHFLGKTALNYLLITLCISPLARRFKQPLLIQLRRVL GLYCFFWACLHLLVFIWLDLNWEVTLFAEEVVKRPYMTLGALTWVILLALSITSINVIRRRMKRAWLTLHRTIYWAVLLA TIHYYWSVKSGLIEPIIYFAICFTLLAQRKDYFKSFLKHYAKKKSV
Sequences:
>Translated_206_residues MKISKTGLLSAKALIHLASLSTFLYLWLLVEQNALGADPVKEMIHFLGKTALNYLLITLCISPLARRFKQPLLIQLRRVL GLYCFFWACLHLLVFIWLDLNWEVTLFAEEVVKRPYMTLGALTWVILLALSITSINVIRRRMKRAWLTLHRTIYWAVLLA TIHYYWSVKSGLIEPIIYFAICFTLLAQRKDYFKSFLKHYAKKKSV >Mature_206_residues MKISKTGLLSAKALIHLASLSTFLYLWLLVEQNALGADPVKEMIHFLGKTALNYLLITLCISPLARRFKQPLLIQLRRVL GLYCFFWACLHLLVFIWLDLNWEVTLFAEEVVKRPYMTLGALTWVILLALSITSINVIRRRMKRAWLTLHRTIYWAVLLA TIHYYWSVKSGLIEPIIYFAICFTLLAQRKDYFKSFLKHYAKKKSV
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=204, Percent_Identity=44.6078431372549, Blast_Score=162, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 24096; Mature: 24096
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISKTGLLSAKALIHLASLSTFLYLWLLVEQNALGADPVKEMIHFLGKTALNYLLITLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISPLARRFKQPLLIQLRRVLGLYCFFWACLHLLVFIWLDLNWEVTLFAEEVVKRPYMTLG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH ALTWVILLALSITSINVIRRRMKRAWLTLHRTIYWAVLLATIHYYWSVKSGLIEPIIYFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICFTLLAQRKDYFKSFLKHYAKKKSV HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKISKTGLLSAKALIHLASLSTFLYLWLLVEQNALGADPVKEMIHFLGKTALNYLLITLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISPLARRFKQPLLIQLRRVLGLYCFFWACLHLLVFIWLDLNWEVTLFAEEVVKRPYMTLG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH ALTWVILLALSITSINVIRRRMKRAWLTLHRTIYWAVLLATIHYYWSVKSGLIEPIIYFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICFTLLAQRKDYFKSFLKHYAKKKSV HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA