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The map label for this gene is yedY [H]

Identifier: 119944349

GI number: 119944349

Start: 755996

End: 757021

Strand: Direct

Name: yedY [H]

Synonym: Ping_0576

Alternate gene names: 119944349

Gene position: 755996-757021 (Clockwise)

Preceding gene: 119944348

Following gene: 119944350

Centisome position: 16.58

GC content: 40.35

Gene sequence:

>1026_bases
ATGCTTATAAAAACAAGAAAAAAATCGGATATTAAAGAGTCTCAGTTAACCGATGAAAAGGTTTATAAAAATAGGCGGGT
TGTGCTTAAAGCATTAGGTTTATCTGCATTGAGTATTCCCTTGGCAAGCTCTGTGCAGGCAGGGTTGTTTGATATTTTTT
CGGATAAAGAAAAAACCGATAATTCAGATCTTATCTTTAAACGCAGTGAGTTAATTCACACAAAAAATAGTCGTTTTCAA
TCTTTAACTCCGCTTACGCCGGAAGATAAAATATTACAGTACAATAATTTTTATGAATTTGGTACCGGCAAGGGGGATCC
CTTCTCCTTTGCGCAACAGTTTAAAGTTGATCCCTGGCAGTTGGTTATTGATGGATTAGTTGATAAACCCATAACGCTTA
ATTATGAGGAGTTATTAACACGTTTTGCTATTGAAGAGCGTTTATATCGTATGCGCTGTGTCGAAGCCTGGTCAATGAAT
ATCCCCTGGTTAGGTTTCAGCCTGGCAACGCTGCTTAAAATGGCCTCTCCAAAAAGTAATGCTAAATATGTACGTTTTGA
AACGCTTGAGGATCCCAAGCAGATGCGCGGACAAAGTTCCCGTTTTATTGGAGGAGGCCTTGATTATCCCTATGTCGAAG
GATTGCGTCTTGATGAAGCGATGAATCCTCTGGTGTTATTATCCGTCGGTTTATATGGTAAAACGCTGGCACCTCAAAAC
GGTGCCCCGATTCGTTTGGTTGTTCCCTGGAAGTATGGTTTTAAAAGTATTAAATCTATTGTCAAAATCACGTTAACGGA
TAAAGCACCCGTTAATACCTGGCAAAAGATTGCCGCTAACGAGTATGGTTTTTTTGCCAATGTTAACCCGCAAGTTGATC
ACCCGCGATGGAGCCAGGCAAGTGAACGTTTTATCGGACCGGGTAATCTGTTTGCAGCCTCTCGCAAGCCGACTCTGCCT
TTTAATGGTTATCAGGAAGAAGTTGCTTCTCTGTATAAAGGGTTAGATTTAACCCGTTATTATTAA

Upstream 100 bases:

>100_bases
AACCCACTCAGTATAAAAGCATAAATTTTTTATACTGAGTGCAATTAATGTCTATGCTGCAGGGTCTTATCTTTACGATT
AACTTGATTCGGAGTGGATT

Downstream 100 bases:

>100_bases
AAAGGAGCACAGGTGAAAATTTCTAAAACGGGTCTATTATCTGCTAAGGCGCTGATTCATTTGGCTTCTCTGTCCACGTT
TTTATATTTGTGGCTGTTGG

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLIKTRKKSDIKESQLTDEKVYKNRRVVLKALGLSALSIPLASSVQAGLFDIFSDKEKTDNSDLIFKRSELIHTKNSRFQ
SLTPLTPEDKILQYNNFYEFGTGKGDPFSFAQQFKVDPWQLVIDGLVDKPITLNYEELLTRFAIEERLYRMRCVEAWSMN
IPWLGFSLATLLKMASPKSNAKYVRFETLEDPKQMRGQSSRFIGGGLDYPYVEGLRLDEAMNPLVLLSVGLYGKTLAPQN
GAPIRLVVPWKYGFKSIKSIVKITLTDKAPVNTWQKIAANEYGFFANVNPQVDHPRWSQASERFIGPGNLFAASRKPTLP
FNGYQEEVASLYKGLDLTRYY

Sequences:

>Translated_341_residues
MLIKTRKKSDIKESQLTDEKVYKNRRVVLKALGLSALSIPLASSVQAGLFDIFSDKEKTDNSDLIFKRSELIHTKNSRFQ
SLTPLTPEDKILQYNNFYEFGTGKGDPFSFAQQFKVDPWQLVIDGLVDKPITLNYEELLTRFAIEERLYRMRCVEAWSMN
IPWLGFSLATLLKMASPKSNAKYVRFETLEDPKQMRGQSSRFIGGGLDYPYVEGLRLDEAMNPLVLLSVGLYGKTLAPQN
GAPIRLVVPWKYGFKSIKSIVKITLTDKAPVNTWQKIAANEYGFFANVNPQVDHPRWSQASERFIGPGNLFAASRKPTLP
FNGYQEEVASLYKGLDLTRYY
>Mature_341_residues
MLIKTRKKSDIKESQLTDEKVYKNRRVVLKALGLSALSIPLASSVQAGLFDIFSDKEKTDNSDLIFKRSELIHTKNSRFQ
SLTPLTPEDKILQYNNFYEFGTGKGDPFSFAQQFKVDPWQLVIDGLVDKPITLNYEELLTRFAIEERLYRMRCVEAWSMN
IPWLGFSLATLLKMASPKSNAKYVRFETLEDPKQMRGQSSRFIGGGLDYPYVEGLRLDEAMNPLVLLSVGLYGKTLAPQN
GAPIRLVVPWKYGFKSIKSIVKITLTDKAPVNTWQKIAANEYGFFANVNPQVDHPRWSQASERFIGPGNLFAASRKPTLP
FNGYQEEVASLYKGLDLTRYY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=333, Percent_Identity=57.6576576576577, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38836; Mature: 38836

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKTRKKSDIKESQLTDEKVYKNRRVVLKALGLSALSIPLASSVQAGLFDIFSDKEKTD
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCC
NSDLIFKRSELIHTKNSRFQSLTPLTPEDKILQYNNFYEFGTGKGDPFSFAQQFKVDPWQ
CCCEEEEHHHHHHCCCCCCCCCCCCCCCHHEEEECCEEEECCCCCCCHHHHHHHCCCHHH
LVIDGLVDKPITLNYEELLTRFAIEERLYRMRCVEAWSMNIPWLGFSLATLLKMASPKSN
HHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
AKYVRFETLEDPKQMRGQSSRFIGGGLDYPYVEGLRLDEAMNPLVLLSVGLYGKTLAPQN
CEEEEEECCCCHHHHCCCCCCEECCCCCCCHHCCEEHHHHCCCEEEEEECCCCCCCCCCC
GAPIRLVVPWKYGFKSIKSIVKITLTDKAPVNTWQKIAANEYGFFANVNPQVDHPRWSQA
CCCEEEEECCHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHH
SERFIGPGNLFAASRKPTLPFNGYQEEVASLYKGLDLTRYY
HHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLIKTRKKSDIKESQLTDEKVYKNRRVVLKALGLSALSIPLASSVQAGLFDIFSDKEKTD
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCC
NSDLIFKRSELIHTKNSRFQSLTPLTPEDKILQYNNFYEFGTGKGDPFSFAQQFKVDPWQ
CCCEEEEHHHHHHCCCCCCCCCCCCCCCHHEEEECCEEEECCCCCCCHHHHHHHCCCHHH
LVIDGLVDKPITLNYEELLTRFAIEERLYRMRCVEAWSMNIPWLGFSLATLLKMASPKSN
HHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
AKYVRFETLEDPKQMRGQSSRFIGGGLDYPYVEGLRLDEAMNPLVLLSVGLYGKTLAPQN
CEEEEEECCCCHHHHCCCCCCEECCCCCCCHHCCEEHHHHCCCEEEEEECCCCCCCCCCC
GAPIRLVVPWKYGFKSIKSIVKITLTDKAPVNTWQKIAANEYGFFANVNPQVDHPRWSQA
CCCEEEEECCHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHH
SERFIGPGNLFAASRKPTLPFNGYQEEVASLYKGLDLTRYY
HHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA