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The map label for this gene is dctQ-2 [C]

Identifier: 119944312

GI number: 119944312

Start: 689415

End: 690038

Strand: Reverse

Name: dctQ-2 [C]

Synonym: Ping_0539

Alternate gene names: 119944312

Gene position: 690038-689415 (Counterclockwise)

Preceding gene: 119944313

Following gene: 119944311

Centisome position: 15.13

GC content: 40.54

Gene sequence:

>624_bases
ATGAAGCGTGGATTTTTTACCCGATTAGGGGAAATAACTGACTATATGGAAGAGACGCTCATTGCGCTCTTTTTAGGTTT
AATGACCCTGTTAACCTTTGCCAATGTCGTTGTCCGATATATTTTCAACGATAATATTTTATGGGCATTGGAGCTGACCG
TGTTTATGTTTGCCTGGATGGTGCTGGTCGGTGCCTCTTATCTGGTGAAAAAACATTTTCATATCGGGGTCGACGTGATT
ATTAATCTTGCGCCTGCAGGGCTTAAAAAAGTCTTTGCATTAATCGCCGTTGCTTCATGCTTAACGTTTTCAATTTTATT
ATTAATTGGTTCTTGGGACTACTGGCTCCCTTTTATAACGGACCAGGCCTGGTATGAAACTCAGGATATTCCAATGCCAG
ATTTCTTACAATTTTTATCTGGCTGGTTCAATGAAGGAGAACGATATGAAAAATTACCCCGTTTTATCCCCTATTTTGCG
CTGCCGCTGAGCATGGCAATGATGACCTATCGATTTCTGCAAATTGCCTGGCTGGTTGCCACCAACAAAATAGATAAGAT
GATTGCAAGTCATGAAGCCGAAGAAGATTTAGATTCGTTACACAATTCAGAGAAAGGAGAATAA

Upstream 100 bases:

>100_bases
TCAATAGCCCACAACTAATAACCAATAACTAATAACCAATACCCAATAACTAATAACCAATACCCAATAACTAATAACTA
ATAAGTTCGGAGTGTGGCAA

Downstream 100 bases:

>100_bases
TTATGGCGATGTTAACCCTTTTTCTAATGGTGATTGTATTCATGACGGTCGGTGTGCCTATTGCGGTTTCACTGGGTCTG
TCGAGTATGATCTTTTTATT

Product: tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport System Permease Small Subunit; C4-Dicarboxylate Transport Protein DctQ; ABC Transporter; TRAP-Type C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate Transporter; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP-Type C4-Dicarboxylate Transporter Small Permease; C4-Dicarboxylate Transport System Small Permease Component; C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; TRAP Transporter DctQ-Like Membrane Protein; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transporter Small Subunit; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKRGFFTRLGEITDYMEETLIALFLGLMTLLTFANVVVRYIFNDNILWALELTVFMFAWMVLVGASYLVKKHFHIGVDVI
INLAPAGLKKVFALIAVASCLTFSILLLIGSWDYWLPFITDQAWYETQDIPMPDFLQFLSGWFNEGERYEKLPRFIPYFA
LPLSMAMMTYRFLQIAWLVATNKIDKMIASHEAEEDLDSLHNSEKGE

Sequences:

>Translated_207_residues
MKRGFFTRLGEITDYMEETLIALFLGLMTLLTFANVVVRYIFNDNILWALELTVFMFAWMVLVGASYLVKKHFHIGVDVI
INLAPAGLKKVFALIAVASCLTFSILLLIGSWDYWLPFITDQAWYETQDIPMPDFLQFLSGWFNEGERYEKLPRFIPYFA
LPLSMAMMTYRFLQIAWLVATNKIDKMIASHEAEEDLDSLHNSEKGE
>Mature_207_residues
MKRGFFTRLGEITDYMEETLIALFLGLMTLLTFANVVVRYIFNDNILWALELTVFMFAWMVLVGASYLVKKHFHIGVDVI
INLAPAGLKKVFALIAVASCLTFSILLLIGSWDYWLPFITDQAWYETQDIPMPDFLQFLSGWFNEGERYEKLPRFIPYFA
LPLSMAMMTYRFLQIAWLVATNKIDKMIASHEAEEDLDSLHNSEKGE

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23960; Mature: 23960

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGFFTRLGEITDYMEETLIALFLGLMTLLTFANVVVRYIFNDNILWALELTVFMFAWM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLVGASYLVKKHFHIGVDVIINLAPAGLKKVFALIAVASCLTFSILLLIGSWDYWLPFIT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DQAWYETQDIPMPDFLQFLSGWFNEGERYEKLPRFIPYFALPLSMAMMTYRFLQIAWLVA
CHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNKIDKMIASHEAEEDLDSLHNSEKGE
HHHHHHHHHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRGFFTRLGEITDYMEETLIALFLGLMTLLTFANVVVRYIFNDNILWALELTVFMFAWM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLVGASYLVKKHFHIGVDVIINLAPAGLKKVFALIAVASCLTFSILLLIGSWDYWLPFIT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DQAWYETQDIPMPDFLQFLSGWFNEGERYEKLPRFIPYFALPLSMAMMTYRFLQIAWLVA
CHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNKIDKMIASHEAEEDLDSLHNSEKGE
HHHHHHHHHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA