| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944291
Identifier: 119944291
GI number: 119944291
Start: 660830
End: 661090
Strand: Direct
Name: 119944291
Synonym: Ping_0517
Alternate gene names: NA
Gene position: 660830-661090 (Clockwise)
Preceding gene: 119944289
Following gene: 119944292
Centisome position: 14.49
GC content: 39.85
Gene sequence:
>261_bases ATGGCTGTCAACGTTAAAAACAATGACGGTTATTATGTCCCTGACCATAGGAGGATGATAAAATCAGCAAAATCCCGAAT AATGTTATTGCAGCATCGGGTAAAGGAAAAAATACTGCAAGTCTGGTATGATTTTAGCAGAGCGCTGCTTGCTGAGAGAG GTCATATTGGGAATGAAAAAAGAACCGATTTTATTAACGCCGCTTATAAGAAAGATCAAGTGCTTGAAGTACTTACGGGA CTCGCTGCAAAGCTTATCTGA
Upstream 100 bases:
>100_bases AAGAAATGGACTGCACAAAAAAGTGGCATCAATACTGCTCTGTCTTGGTTCATTTATGACGGACATGATACTCACAGCGC CTCAGTAGCAAGGCGCGCCT
Downstream 100 bases:
>100_bases AACGTCACCAATGCGTCATTGATACTGGCCGATCAAGTGGCTTAATTGGACTCATCCTGTGTAACTAAAATAATAGTAGA AGATATAAGGTTAAATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAVNVKNNDGYYVPDHRRMIKSAKSRIMLLQHRVKEKILQVWYDFSRALLAERGHIGNEKRTDFINAAYKKDQVLEVLTG LAAKLI
Sequences:
>Translated_86_residues MAVNVKNNDGYYVPDHRRMIKSAKSRIMLLQHRVKEKILQVWYDFSRALLAERGHIGNEKRTDFINAAYKKDQVLEVLTG LAAKLI >Mature_85_residues AVNVKNNDGYYVPDHRRMIKSAKSRIMLLQHRVKEKILQVWYDFSRALLAERGHIGNEKRTDFINAAYKKDQVLEVLTGL AAKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9999; Mature: 9868
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNVKNNDGYYVPDHRRMIKSAKSRIMLLQHRVKEKILQVWYDFSRALLAERGHIGNEK CEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RTDFINAAYKKDQVLEVLTGLAAKLI HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVNVKNNDGYYVPDHRRMIKSAKSRIMLLQHRVKEKILQVWYDFSRALLAERGHIGNEK EECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RTDFINAAYKKDQVLEVLTGLAAKLI HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA