| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is wecB [H]
Identifier: 119944210
GI number: 119944210
Start: 545606
End: 546790
Strand: Reverse
Name: wecB [H]
Synonym: Ping_0431
Alternate gene names: 119944210
Gene position: 546790-545606 (Counterclockwise)
Preceding gene: 119944212
Following gene: 119944209
Centisome position: 11.99
GC content: 40.76
Gene sequence:
>1185_bases ATGGTTATGTCTATTAAAATATTAACTGTCTTTGGTACTCGACCTGAAGCAATCAAAATGGCTCCACTTGTCGATGCGCT AAAAAAACAGCCGGGTATTGACGCTAAAGTTTGCGTTACAGCACAACATAGAGAGATGCTTGACCAGGTACTTAACCTGT TTGCAATCACCCCCGACTATGATCTTAATATAATGAAGCCAGGGCAGTCTTTATCCGATGTAACCACTAATATTTTATTA GGGCTTGAACCTATTCTAAAAGAATTTAAGCCCCACCTTATCTTAGTGCACGGTGATACCTCAACGACATTATCGACCAG TTTAGCCGCATTTTATCAGCAGATTCCAATTGGCCATGTTGAAGCAGGTTTACGTACTGGCGATCTGAACTCTCCTTGGC CAGAAGAAGGGAATCGCCGACTTACCAGCGCTATTACTAAACTTCATTTTGCCCCAACCGAAAGTGCGAAAGAAAATTTA CTTAGAGAGTGGATCTCCGCTGATAGCATTGAAGTAACCGGCAATACCGTTATTGATGCTTTGATGCAGGTGATCTATAA ATTAAAAAACAACACACAACTTTCAAATACATTAGCCAAGCAGTTCCCCCAATTAGATGCCAATAAAAAGCTCATCTTAG TAACAGGTCATCGCAGAGAAAATTTTGGTAGTGGATTTGAGCGAATTTGTGAGGCGCTGGCAGAAATTGCAAGAAGACAT TCAAATGTCCAGATAATCTACCCTGTGCATCTAAACCCCAATGTCCGTGAACCGGTTAATCGGATTTTACGCAATCTTGA CAATATCCATTTAATAGAGCCGCAAGATTACCTTCCTTTTGTTTATTTAATGGATAAAGCGCACATTATTTTAACTGATT CTGGTGGCATTCAAGAAGAAGCACCAAGTTTAGGCAAACCCGTACTGGTGATGCGAGATGTCACCGAGCGACCTGAAGCG CTTTCCGCAGGAACGGTTCAACTGGTTGGTACGGACAAAAATAATATTATCAATGCCGTTGAAAAATTACTTCAAGATGA AATAACTTATAACCGTATGAGTCGTGCACATAACCCCTATGGAGATGGGCAGTCTTGTCAGAAAATAATCAATAGAATCA TGCATTATTTTGTTACACAAAAGGTGGAAGCAGTCACTGCGGCTTCAGAGCCTATTACAGTTTAG
Upstream 100 bases:
>100_bases GAACTAACATAATTTATGTAGTTTTAATTTAGGTTAAACAATTTATTACATTTTTAAAATTATTTTTTCCATCTTTAGAT TTTACAGCTCATACGGAAAT
Downstream 100 bases:
>100_bases TTTAACAAAAACACTTAATAGATAAATACAAGGCTACAGGGAGTTATCATGGATTTTGAAAAAGTATCCGTCATCGGGCT TGGCTATATCGGCCTGCCTA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MVMSIKILTVFGTRPEAIKMAPLVDALKKQPGIDAKVCVTAQHREMLDQVLNLFAITPDYDLNIMKPGQSLSDVTTNILL GLEPILKEFKPHLILVHGDTSTTLSTSLAAFYQQIPIGHVEAGLRTGDLNSPWPEEGNRRLTSAITKLHFAPTESAKENL LREWISADSIEVTGNTVIDALMQVIYKLKNNTQLSNTLAKQFPQLDANKKLILVTGHRRENFGSGFERICEALAEIARRH SNVQIIYPVHLNPNVREPVNRILRNLDNIHLIEPQDYLPFVYLMDKAHIILTDSGGIQEEAPSLGKPVLVMRDVTERPEA LSAGTVQLVGTDKNNIINAVEKLLQDEITYNRMSRAHNPYGDGQSCQKIINRIMHYFVTQKVEAVTAASEPITV
Sequences:
>Translated_394_residues MVMSIKILTVFGTRPEAIKMAPLVDALKKQPGIDAKVCVTAQHREMLDQVLNLFAITPDYDLNIMKPGQSLSDVTTNILL GLEPILKEFKPHLILVHGDTSTTLSTSLAAFYQQIPIGHVEAGLRTGDLNSPWPEEGNRRLTSAITKLHFAPTESAKENL LREWISADSIEVTGNTVIDALMQVIYKLKNNTQLSNTLAKQFPQLDANKKLILVTGHRRENFGSGFERICEALAEIARRH SNVQIIYPVHLNPNVREPVNRILRNLDNIHLIEPQDYLPFVYLMDKAHIILTDSGGIQEEAPSLGKPVLVMRDVTERPEA LSAGTVQLVGTDKNNIINAVEKLLQDEITYNRMSRAHNPYGDGQSCQKIINRIMHYFVTQKVEAVTAASEPITV >Mature_394_residues MVMSIKILTVFGTRPEAIKMAPLVDALKKQPGIDAKVCVTAQHREMLDQVLNLFAITPDYDLNIMKPGQSLSDVTTNILL GLEPILKEFKPHLILVHGDTSTTLSTSLAAFYQQIPIGHVEAGLRTGDLNSPWPEEGNRRLTSAITKLHFAPTESAKENL LREWISADSIEVTGNTVIDALMQVIYKLKNNTQLSNTLAKQFPQLDANKKLILVTGHRRENFGSGFERICEALAEIARRH SNVQIIYPVHLNPNVREPVNRILRNLDNIHLIEPQDYLPFVYLMDKAHIILTDSGGIQEEAPSLGKPVLVMRDVTERPEA LSAGTVQLVGTDKNNIINAVEKLLQDEITYNRMSRAHNPYGDGQSCQKIINRIMHYFVTQKVEAVTAASEPITV
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=366, Percent_Identity=68.3060109289617, Blast_Score=516, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 43945; Mature: 43945
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSIKILTVFGTRPEAIKMAPLVDALKKQPGIDAKVCVTAQHREMLDQVLNLFAITPDY CEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHEECCCCC DLNIMKPGQSLSDVTTNILLGLEPILKEFKPHLILVHGDTSTTLSTSLAAFYQQIPIGHV CCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHH EAGLRTGDLNSPWPEEGNRRLTSAITKLHFAPTESAKENLLREWISADSIEVTGNTVIDA HCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHH LMQVIYKLKNNTQLSNTLAKQFPQLDANKKLILVTGHRRENFGSGFERICEALAEIARRH HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC SNVQIIYPVHLNPNVREPVNRILRNLDNIHLIEPQDYLPFVYLMDKAHIILTDSGGIQEE CCEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCC APSLGKPVLVMRDVTERPEALSAGTVQLVGTDKNNIINAVEKLLQDEITYNRMSRAHNPY CCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GDGQSCQKIINRIMHYFVTQKVEAVTAASEPITV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVMSIKILTVFGTRPEAIKMAPLVDALKKQPGIDAKVCVTAQHREMLDQVLNLFAITPDY CEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHEECCCCC DLNIMKPGQSLSDVTTNILLGLEPILKEFKPHLILVHGDTSTTLSTSLAAFYQQIPIGHV CCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHH EAGLRTGDLNSPWPEEGNRRLTSAITKLHFAPTESAKENLLREWISADSIEVTGNTVIDA HCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHH LMQVIYKLKNNTQLSNTLAKQFPQLDANKKLILVTGHRRENFGSGFERICEALAEIARRH HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC SNVQIIYPVHLNPNVREPVNRILRNLDNIHLIEPQDYLPFVYLMDKAHIILTDSGGIQEE CCEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCC APSLGKPVLVMRDVTERPEALSAGTVQLVGTDKNNIINAVEKLLQDEITYNRMSRAHNPY CCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GDGQSCQKIINRIMHYFVTQKVEAVTAASEPITV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]