| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944201
Identifier: 119944201
GI number: 119944201
Start: 532509
End: 533069
Strand: Reverse
Name: 119944201
Synonym: Ping_0422
Alternate gene names: NA
Gene position: 533069-532509 (Counterclockwise)
Preceding gene: 119944202
Following gene: 119944200
Centisome position: 11.69
GC content: 39.75
Gene sequence:
>561_bases ATGAAAAAAGCTATCTCGTTATTAACCACTTCGTTGGTTCTTTTACTCGCAACCAGCACAGCCTCTGCAATACCGATTAA TGGTATAATTAGTCTTGCCGGAAACGCCGCTACCACTTATAATTCATCAACAACCGAAATAAAGGCAGTTGATTTCGATA GTTCATACGTAGGTATCGCTAATGGTGACTTTGCTGCAAACGGGGTTACAGTTCTCGATATGTCAGTTTCTGCTTTTGGT TCTAATGTAATCATAAATGATATTGCTGATCCAATTACTTTACCAATATCCCCTTTATGGTTAGTAGAAGGGTTTACATT TAATCTTGAAAATATCATTAGTAATACAGTTGCTTCAGGTGGAGCAATCATTAACGGTAACGGTACTATGTCACACGCTG GTTATGACGATACTTTGTTTACTTGGGTATTTACCACTCAAGTAGGTAGTGATAAGACAACATTCTCTGCTAGATCTGTT CCTGCGCCGGCTGGTGCAGCGTTGTTAGGTTTGGGCTTACTCGGTTTTGGTTTCGCCCGTCGTAACAAAAAAGCATCATA A
Upstream 100 bases:
>100_bases AAAAAACATAACCGTCTGATATTAAAGTTTTTTTAAGCTTGGCACGCTGTATGCATTATCTAGCATATGGAATCATCCAT ATATATTAAGGAGTATTAAA
Downstream 100 bases:
>100_bases AACCTATTGAGTTAAATCATAGGTTACCCATAAGCCCAAGAATAATAATCTTGGGCTTTTTTTATATATAAAAAACCTTC AATCTAAAGCTGGTCTACAC
Product: 2-deoxy-D-gluconate-3-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKKAISLLTTSLVLLLATSTASAIPINGIISLAGNAATTYNSSTTEIKAVDFDSSYVGIANGDFAANGVTVLDMSVSAFG SNVIINDIADPITLPISPLWLVEGFTFNLENIISNTVASGGAIINGNGTMSHAGYDDTLFTWVFTTQVGSDKTTFSARSV PAPAGAALLGLGLLGFGFARRNKKAS
Sequences:
>Translated_186_residues MKKAISLLTTSLVLLLATSTASAIPINGIISLAGNAATTYNSSTTEIKAVDFDSSYVGIANGDFAANGVTVLDMSVSAFG SNVIINDIADPITLPISPLWLVEGFTFNLENIISNTVASGGAIINGNGTMSHAGYDDTLFTWVFTTQVGSDKTTFSARSV PAPAGAALLGLGLLGFGFARRNKKAS >Mature_186_residues MKKAISLLTTSLVLLLATSTASAIPINGIISLAGNAATTYNSSTTEIKAVDFDSSYVGIANGDFAANGVTVLDMSVSAFG SNVIINDIADPITLPISPLWLVEGFTFNLENIISNTVASGGAIINGNGTMSHAGYDDTLFTWVFTTQVGSDKTTFSARSV PAPAGAALLGLGLLGFGFARRNKKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19099; Mature: 19099
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAISLLTTSLVLLLATSTASAIPINGIISLAGNAATTYNSSTTEIKAVDFDSSYVGIA CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCEEEEE NGDFAANGVTVLDMSVSAFGSNVIINDIADPITLPISPLWLVEGFTFNLENIISNTVASG CCCCCCCCEEEEEEEHHHCCCCEEEECCCCCEECCCCCEEEEECCEECHHHHHHHHHCCC GAIINGNGTMSHAGYDDTLFTWVFTTQVGSDKTTFSARSVPAPAGAALLGLGLLGFGFAR CEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC RNKKAS CCCCCC >Mature Secondary Structure MKKAISLLTTSLVLLLATSTASAIPINGIISLAGNAATTYNSSTTEIKAVDFDSSYVGIA CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCEEEEE NGDFAANGVTVLDMSVSAFGSNVIINDIADPITLPISPLWLVEGFTFNLENIISNTVASG CCCCCCCCEEEEEEEHHHCCCCEEEECCCCCEECCCCCEEEEECCEECHHHHHHHHHCCC GAIINGNGTMSHAGYDDTLFTWVFTTQVGSDKTTFSARSVPAPAGAALLGLGLLGFGFAR CEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC RNKKAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA